KEGG   Lacunisphaera limnophila: Verru16b_03510Help
Entry
Verru16b_03510    CDS       T04567                                 

Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
obg  Lacunisphaera limnophila
Pathway
obg00473  D-Alanine metabolism
obg00550  Peptidoglycan biosynthesis
obg01100  Metabolic pathways
obg01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:obg00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    Verru16b_03510 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Verru16b_03510 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Verru16b_03510 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:obg01011]
    Verru16b_03510 (ddl)
Enzymes [BR:obg01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Verru16b_03510 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:obg01011]
 Precursor biosynthesis
  Amino acid ligase
   Verru16b_03510 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 CPSase_L_D2 ATP-grasp_4 ATP-grasp TTL ATPgrasp_YheCD ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID: AOS46404
UniProt: A0A1D8AZW8
LinkDB All DBs
Position
complement(4117978..4118907)
Genome map
AA seq 309 aa AA seqDB search
MSSPIIAVLAGGTSPEREVSLGSGRAVAQAMACSHLTRLFTVDHDALPEGLDPARHVVFS
TLHGVFGEDGGMQRLLDAGGFSYGGCDAKASDLCFDKWRTRLSVSAMGVPVAPGRHFLAA
GKPTAAALATELGQQVVLKPNRQGSSVGLQIVSSQVGLEIALGGIRAGDWVAERRILGRE
ITVGLLRGRAMGIVEVVPKSGVYDYSSKYTKGLTEYLAPARLSDEMATRVRATAETAFAA
CGCRDYARIDFMISQEGELYLLEINTLPGMKDTSLLPMSARCVGLDFVALCRELVAPAVE
RFQPAAARP
NT seq 930 nt NT seq  +upstreamnt  +downstreamnt
atgagttctcccatcatcgccgtcctcgcgggcggcacatccccggaacgggaggtttcg
ctcggctccggccgcgcggtcgcccaggccatggcctgctcccacctgacgcggctcttc
acggttgatcacgatgcgctccccgagggcctggatccggcgcgacacgtggtgttttcg
accttgcacggggtctttggcgaggacggcggcatgcagcgcctgctcgacgcgggcggc
ttcagctatggcgggtgcgacgccaaggccagcgacctctgcttcgacaagtggcgcacg
cgcctgagcgtgtccgcgatgggcgtcccggtggctccgggccggcatttcctggcggcg
ggcaaacccacggcggcggccctcgccaccgagctcggccaacaggtggtgttgaagccc
aaccggcagggcagcagcgtcggcctccagatcgtttcctcccaggtgggcctggagatc
gcgctcggcggcatccgggccggtgactgggtggcggagcgccgcattctcggacgggag
atcaccgtcggcctgctccgcggtcgcgccatgggcatcgtcgaggtcgtgcccaagtcg
ggggtctacgactactccagcaaatacaccaagggcctcaccgagtacctcgccccggcc
cggctctccgacgagatggccacgcgggtgcgcgcgacggccgaaacggcctttgcggcc
tgcgggtgccgcgactacgcgcggatcgacttcatgatttcccaggagggcgaactgtat
ttgctcgaaatcaacacgctgcccggcatgaaggacaccagcctgctgccgatgagtgcg
cgttgcgtggggttggattttgtcgcgctgtgccgcgaactggttgctcccgccgtggaa
cgattccagccggctgccgcccgtccttga

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