Ooceraea biroi (clonal raider ant): 105274849
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Entry
105274849 CDS
T05778
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
3.6.4.13
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obo03041
]
105274849
03009 Ribosome biogenesis [BR:
obo03009
]
105274849
Enzymes [BR:
obo01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
105274849
Spliceosome [BR:
obo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105274849
Ribosome biogenesis [BR:
obo03009
]
Eukaryotic type
Pre-60S particles
Helicases
105274849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
105274849
NCBI-ProteinID:
XP_011329608
LinkDB
All DBs
Position
8:complement(3369938..3373797)
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AA seq
731 aa
AA seq
DB search
MTSNWDLIKTIDDDEEVSHYSETSDEEDDFQPRKQKKPCTDFNSSFEFEDSGSEYNEDPW
NDLGKYIKRKANMKLDDKIEKAKQRHGSQNETENDPIKIELETAQDDDVMSLSEDELKKD
IIKTKEKKDKKEKTAREKDEETIDFEEYTENQTYDSFHQMNLSRPFLKALMKMNFAQPTP
IQTATIPVALMGRDICGCAATGTGKTAAYMIPTLERLLYKPVGPAVSRVLVLVPTRELGV
QVYQVTKQLAQFTTIKVGLSVGGLDAKVQENVLEKKPDIVIATPGRLIDHLKNSSTFSLL
RIEILILDEADRMLDEYFADQVKYIVQQCSKNRQTMLFSATMTEEVKDLATVSLDKPIKM
FVNSNQDVAFNLRQEFIRIRKKRERDREAILAALVCRTFHDRTIVFVQTKKQAHRLHILL
GLLGVKAGELHGNLTQSQRLESLRRFKDEEINVLLATDVAARGLDISGIKTVINFMMPPS
LQHYIHRVGRTARAGRSGVSVSLVGEQERSLVKDVIKEAKNPVKKRIIPPDIIEKYNKKI
QSLEPNVELILEEERSEKKLTEVENQVNRAEKILKDEDDKDERTAFPQTKKENKKEKENL
QLTQKQVDKNKKQEKVKGRKKKENAQDESMKAEDKKLEKLTAWQARLCKKNMKPKKLYAV
DENDYANKQGSSKRKRSLKRKRSAFDVDLTSKREIKRTRYEANIKKKQNNLKTQKKKFAA
GKGQKKSFKRR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtaattgggatttaataaaaactatcgatgatgatgaggaagtgtcacattac
tctgaaacttcagatgaggaagacgatttccagccacgaaagcaaaagaaaccgtgtaca
gactttaacagcagttttgaatttgaagacagtggctcagagtacaatgaagatccttgg
aatgatttgggcaaatatattaaacggaaagcaaacatgaaattagatgataaaatagaa
aaagccaagcaacgtcatggtagccagaatgaaacggagaatgatcctattaagatagag
cttgaaacagctcaggacgatgatgtcatgtctctatcagaggatgaacttaaaaaagat
atcattaaaaccaaggaaaaaaaagataaaaaggaaaagactgccagagaaaaggatgag
gaaacaattgatttcgaagaatatacggaaaatcaaacctatgattcatttcatcaaatg
aacttgtccagaccttttttaaaggctctgatgaaaatgaatttcgcacaaccaactccc
atacaaacggctactattcctgtagctttgatgggtcgtgatatttgtggctgtgcggca
acgggtactggcaagacggcagcttacatgattcccactttggagagattgttgtacaaa
ccggtcggtcctgccgtttcgcgagttctcgtactcgtgcccactagagagttgggagtg
caagtttatcaagtgacaaaacagttagcacaatttacaacaataaaagttggtttatct
gtgggtggtttagacgcgaaagtacaggaaaatgtattagagaaaaaaccagacattgta
atagcaacacctggcagattaatcgatcacttaaaaaattcatcgactttctcattgctc
aggatagaaatattaattttagatgaagctgatagaatgttggatgagtacttcgctgac
caagtgaaatacattgtgcaacagtgttcgaagaacaggcaaacaatgttgttctctgct
actatgactgaggaagtcaaggatttagccacggtatccctcgacaaacctattaaaatg
tttgtaaatagcaatcaagatgtagccttcaacttgcgtcaggaatttattcgcatacgt
aagaaaagagaaagagaccgtgaagcaattttagcagcgttagtttgtcgaactttccac
gatcgcaccatagtttttgtacagacgaaaaaacaagctcacaggttgcacattttattg
ggactattgggtgtgaaagctggagaacttcatggaaatcttacacagtcgcaacgactg
gaaagtctgcggcgatttaaggatgaagagattaatgtattattagcaacagatgttgca
gcgcgcggcttagacatcagcggtatcaagacggtgattaatttcatgatgccaccaagc
ctgcagcattatatacaccgagtcgggagaactgcacgagcgggacgttcaggcgtttcc
gtatccttggtcggggaacaggaacgttctttggtaaaagatgttatcaaggaagcaaag
aatcctgtcaaaaagagaataataccgcccgatataatagagaaatacaataaaaaaata
caatccctggagccgaacgtagaactaattctggaagaagagagaagcgagaagaaattg
actgaagtagagaatcaagttaatcgtgctgaaaagatacttaaagatgaagatgacaag
gatgagagaactgccttcccccaaaccaaaaaggagaacaagaaagagaaagaaaacctg
caattaactcagaaacaagttgacaaaaataagaaacaagaaaaagtgaagggaagaaaa
aaaaaggagaatgcacaagacgaatctatgaaggcggaagacaaaaaattagaaaagcta
actgcatggcaagcacgattatgtaaaaaaaacatgaaaccgaagaaactttatgctgta
gacgagaatgattacgctaataaacaaggatcgtcaaaaagaaaacggtcattgaaaaga
aaacggtcagcgttcgacgtagatttgacgagtaaaagagaaatcaaaagaacgcgatac
gaggcaaacatcaagaagaaacaaaataatcttaaaacgcagaaaaagaaatttgcagcg
ggaaagggccagaagaaatcctttaaaagacgttaa
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