Ooceraea biroi (clonal raider ant): 105278403
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Entry
105278403 CDS
T05778
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04137
Mitophagy - animal
obo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105278403
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
105278403
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
obo04121
]
105278403
Enzymes [BR:
obo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
105278403
Ubiquitin system [BR:
obo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105278403
Multi subunit Ring-finger type E3
ERAD complex
105278403
LMBR1L-GP78-UBAC2 complex
105278403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
CUE
zf-C3HC4_3
zf-RING_11
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-RING_16
zf-ANAPC11
G2BR
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
105278403
NCBI-ProteinID:
XP_011335766
LinkDB
All DBs
Position
10:complement(2626643..2638941)
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AA seq
604 aa
AA seq
DB search
MPMEFLDRLPVPNLRVYTTISFAILSCSIYYATQIIKDPAWKTNHTYVDVGANVVIGDDV
SLADSRSLGTHLKELAECMVDEPVCIWTLINMAYCILILLGKSIQKLVFGELRASERQHL
KDKFWNFVFYKFIFVFGVLNVQYMDEVVLWWAWFTALGFLSLLSQLCKDRFEYLSFSPTT
PGWSHARLLGLLAAILALSSFMLLLCTAAAFFFISFNTFAFMAAECILLGVRTIHVMLRY
VIHLYDTRGAGTSAQRSWDKRGPLTYYTDLTSELIVLAVDFLHHVHMLLWSNIFLSMASL
VICMQLRYLFYEIQRRITKHRNYLAVLNHMEQNYPMASPDELAENSDNCAICWEKMESAR
KLPCAHLFHNSCLQSWLEQDTSCPTCRLALSMQANHRESNQEMQPEPQTPTRRNGNFFLF
LDGSRYVSWLPSFSVEVSHNRLRGNISTLAHTNSQMDAMARQVQQLFPHYPRNVILEDLR
MTRSVEWTIENILDGVLTVPHHLIEEPQAESVPQTQTSMMNIVPSSSVQNSPDPRFDIPF
ADSGEEPSSLGGRFSKSSAEREVILQRRKEHMRLTARRRYLEKHRKLEIESTSSRRTSTE
NTMS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgccgatggaattcctagatcgattgccggtcccaaaccttcgggtgtacaccaccata
agttttgccatcctctcctgttccatatattatgccacacaaataatcaaagatcctgcc
tggaagacgaatcacacttacgttgacgtaggcgccaatgtcgtaattggagacgatgtc
agtttagccgattccaggagccttggcacgcaccttaaggagctggcggaatgcatggtg
gacgaacctgtttgcatatggactttaatcaacatggcttactgcatactgatccttctt
ggaaaatctatccagaagctcgtattcggtgagctacgagcctcagagagacaacatctg
aaagacaaattctggaactttgtcttttataaatttattttcgtctttggcgttttaaat
gtgcaatatatggacgaggttgtgctatggtgggcatggttcacggcgctcggtttcctg
agtcttctcagccaactctgcaaggatcgattcgaatatctatcgttttcacctactaca
ccaggatggagtcatgcgcgacttctcggattgttggctgcaattcttgcgctatcttcc
tttatgcttctgttgtgcaccgctgcagctttcttctttatatcttttaacactttcgct
tttatggccgctgagtgcattctgctcggagtccgtactatccacgttatgctacgctat
gtgattcatctgtacgatacacgtggcgccggcacttcggctcaacgctcttgggacaag
cgcggtcccttgacctactacacggacctgacctcggaattgatcgtactggcagtcgac
tttcttcatcacgttcacatgttgctatggagcaatatctttctgagcatggcatcgctc
gtaatttgtatgcaattgagatatttgttctacgagatacaacggaggatcaccaagcac
aggaactatttggccgtactaaatcatatggagcagaattatccaatggcatcgccggac
gagttagctgaaaactctgataactgtgcaatatgctgggagaagatggaaagcgctcgt
aagttaccctgcgcgcacctgttccacaactcgtgcctgcagtcctggttagaacaagac
acatcatgtcccacctgccgactggctctaagtatgcaggcgaaccacagggagagcaac
caggagatgcagccggagccccagacccctacgagaagaaacggcaacttcttcctcttt
cttgacggctctagatacgtgtcttggttgcccagcttttccgttgaggtctcgcataac
cggttacgcggtaacatttctacattggcgcacaccaattcccagatggacgctatggcg
agacaggttcaacaactcttccctcattatcctcgcaacgtgatcctagaggatctcaga
atgacgcgatcggtcgagtggacaattgagaatatactcgatggggtattaaccgtaccg
caccacctaattgaagaaccgcaagcggaatccgtcccacaaacgcaaacatccatgatg
aacatcgtgcccagttcttcagtgcaaaattcgccagatcctagattcgatattccattt
gccgacagtggagaagaaccgtcgagtcttggcggacgtttctcgaaatcatccgccgag
agagaagtcatacttcagcggcggaaagagcacatgcgattaacggcgcgtaggaggtac
ctggagaagcatcggaagctggagatcgagtcgactagttcgcggagaacgagcaccgag
aatactatgtcttag
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