Ooceraea biroi (clonal raider ant): 105279716
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Entry
105279716 CDS
T05778
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105279716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obo03019
]
105279716
Messenger RNA biogenesis [BR:
obo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105279716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
ZapB
ERM_helical
YabA
Motif
Other DBs
NCBI-GeneID:
105279716
NCBI-ProteinID:
XP_011337969
LinkDB
All DBs
Position
7:12768582..12777996
Genome browser
AA seq
2369 aa
AA seq
DB search
MESAEENSAVLRTIMNDQELAQIPTELLKKIQTYCSGQLDDFLTAKGVFDTCRRNLEQNL
EKAQKELAEQKANCDEYKEKFEFVERTNVEISNSFEDARNEVHRLQETVKRLEKENGDLR
RQRDTITDDTNALQLQVERRDTEIERMRIELSSLSSQLQAAIAAKCQTLADTEEIRSREM
TLDFKEKRLEQERVLLSQQMAGLEEELAKRTSELQTARSEASARALLIDTKLSQREEELR
IANEASSQLRESVSSLQKQCDELVQKVEQQRAHEIAINDSYQKEISAQKNLTSLYESMKN
DANAKAEAISNAASELQKLVDSTAEEYGLLETKYNQLELQHKQDIEEKEQSIQELTKELV
HANELVKNIQQEKLDQAVEQLAPTAAITSRVLRKGLSLTQIYTQLVEVTNELTLEREENE
RLKSQMDVILRELEQKAPLLQQQRHDYETAMSNVATLTTRLDELLAENQRLHESSDEANR
LAKHHTTENQRLKTELADLARQVCFLLKEVQESRTGTSIETRNLSSSVDTDDILSSQIIS
KKLVTFKDIEELQENNQKLLAVVRALSSRQEEIERATDEINSGEMKEKLDRYMEQLTEMQ
TAQDRQSKMLDNLLKQRDMYKNMYQQTLKSSTEKKKDELEENAEESKSKSEEELKATKDD
EEKKKEWSKKLQEAEDKCKHISDEYETYRKERTAHEKMLGEEVDRLRKEAEANSARCCRL
RAQLDSANERFTLLQGNVASYKSQIKVLEEKCTNYSVTIGKHEQSIMILKDETLAAQTRL
SRAEVQLENIRQERQMLKDSEGRLLKEREVYQRERQTQVLLKADMESIKASLERVQAEGH
LRAEQRLDDANRECAALRRRLQEEQDRFRELAGHLERQLATDRERLKEERELCERLRTEL
DQLRETDAQNSQKIEALNNKLRQAATHSISKPLMGEEGLVKRIKELEMQLSASQAEMKSF
SEQLKTARQQNQQYCDIAESAETQLRELTAEYNKCKEELENALKESRVEITSLQKRVKDL
SDDLSRVSNGRQETDLELRERLAEAERKMEELDELKGELELLKGDVKTASTVAKEAEDKY
TREMMQHSADLQILAKLKEEAQDFQQRLSVLIQERNAAVEALEVEKSASKEREQRFVSEI
EETHKRITDLDTQNALLHNQIQELGDRVAIMQSQQTKISGRESPDTSLETLNKSFTSLEE
DSKSVEQLLRVMKYLRREKDLALAKSDVLRAENLRLKSQVEVAEKRLKETESLLNSEREK
SEVDVMTTSKHAELLRKVETLNAITDSNRILREERDSLSAKVNELTAKVNALSEEVVPLR
DISRDLTAKTEALAEENTSLKGEATRWRQRANTLLERANKASPEDWRRLQTERENLSKLL
TSEREIHAKRSEEFNQVKVEKAKLEEQLVQLQKQIQTQDEQMLRASEEARKLGHELNEAL
ADSSSKVKDLMLLKKELDDKETALSDIRSKEMQIRRIAKKYKTQFEELARSVEEEKNRNE
GSRNENSSVIMQEREDQLREEGRQELRQANIELTTKIDELTHQITAAQNETETLRKEIEA
INRSSIEKEERAKQVLKGARTKIMQLTESKKMCEKELLDLKSRLESAGGSAGVQDDPETE
HDARLVALKSQLEARISRLEHEKSEIQAEKDTLSQRITQLQRQLSGGSGVSATTEPPTAN
IKPMSARAETPLASIRPMSVVVQSRTVAVLPTTAGAPVMVAPHQMQQQQQQVVHTTETSS
PTSSLTDFQPASTSSSSQSAQTSGLRQLAVQPQLSESAESTQREDPESAETLNVQSQQQQ
CQQQQQQQQQAVALVSPRVEQQQQQQQVAVSDQQQTVASSSTQSVSTSQASTGLKRPRGL
DSTASGSGIVEGVDHGRQEQGQSPKPKRSRPDISATASASASEVEYQVPTSSQRDQDEEV
EEGCVVVVDCDEGEGGGNHQTQEEEEFDNDTYEEMEEEEEMPYEVEVEVERDNNEVEIIM
EEDSTSVEVPRQGQAAIPTNQQQSEAISSAGPTGEPPTSFTARSSRGIAPMPRQQQQQHL
LLPQQGYEDGGDDCIVPSTPTLFVPRRDGFGEAVSSPQVPQGRFTFGDPSAPTTASSTPS
LTTPTGSATRTIFGSSNSAVAQVVQESLDDSRMDLAQLEDGGTGRSVPTTPLQVSPAADL
PPSTSSSQAEEQETTASVAPITITATSGDNVEEPSIPSIRIVGADDQQRGSTEATESSAT
PSEGVSSEGEKRSEEPVALTSGEDDSVDTAEATEEAGSEIVEDDVEEESREAEASPSSNT
RQRTMAASLAAAAASNGARGVTVRRSPRSPFRAARSARPTPIVWGESQSGRGQPVLRGHS
TRGTTNEGGRGRGTRGRRMRGKYSYGRYS
NT seq
7110 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagccgaagaaaattccgccgttcttcgaacgataatgaatgaccaagaattg
gcgcagattccgacggaactgttaaagaaaattcaaacatactgcagcggacaattggac
gattttctaaccgctaaaggggttttcgatacgtgtcgaaggaatttagaacaaaacttg
gaaaaggcacagaaagaacttgcggagcaaaaagcgaattgtgacgagtacaaggaaaag
tttgagttcgtggaaaggactaatgtagagatatctaacagctttgaggatgcgaggaat
gaagtacatagattgcaggaaactgtaaaacgattggagaaggaaaatggtgatttacgc
agacagagggacacaatcacagatgatacaaatgcattgcaactgcaagttgaaaggcgg
gatactgagattgaaaggatgcgcatcgaattatcctccttgagctctcagcttcaagct
gccattgcagcaaagtgtcaaactctagctgacacggaggaaattcgcagtcgagaaatg
actttagattttaaagaaaaacgactggagcaagaacgcgtgcttctttcccaacaaatg
gcgggtctcgaagaggaattagccaagaggacctctgaactgcagacggcaaggtctgaa
gcatctgccagagcactcttaattgataccaaactgtctcagcgtgaggaggagttacgt
atagccaacgaagccagttcccaattgcgggagtcggtttcctctcttcagaagcaatgc
gacgagctagtccagaaagtggagcagcaaagggctcacgaaatcgccataaacgattcc
taccagaaagagattagtgcacagaaaaatctgactagtttatatgaatcgatgaagaac
gatgccaatgccaaggctgaggcgatctccaatgcagcgagcgagctgcagaaactcgta
gacagcactgcggaagagtatggactcttggaaacgaagtataaccaattggagctacag
cataagcaagacatcgaggaaaaggagcagagtattcaggagttgacaaaggaattggta
cacgctaacgaattggtgaagaatatccagcaagagaaattagaccaagctgtagaacaa
ctggcaccaacagcagccataacaagccgagtattgcgaaagggtctgagccttacgcaa
atttacactcaattggtcgaagtcaccaatgaactgactctggaacgagaggagaatgaa
cgcctgaaatctcagatggacgtgatccttcgtgaattagagcagaaggcgccattgctg
cagcaacaacgacatgattatgaaacggccatgtcgaacgttgcaacgctcaccactaga
ttggatgaactgcttgcggagaaccagcgtctgcacgaaagttctgacgaggctaaccgt
ctcgccaagcatcacacaacggagaatcagagattgaaaacggaactcgccgatctggcc
agacaagtatgtttcctccttaaagaggtccaagaaagccgcactggtaccagtatagaa
acccgaaacttgtcatcctccgtagacacagacgacatcttgtcatcgcagattatcagc
aagaagctggtgactttcaaagacattgaggagctacaagaaaataatcagaagctcttg
gccgttgtccgcgcattatcttcgaggcaggaagagatcgaacgggctactgacgagata
aattcgggcgagatgaaggagaagctggatcgttatatggaacaacttacagaaatgcag
actgcacaggataggcagtcgaagatgctggataatcttttgaaacaaagggacatgtac
aagaacatgtaccaacagacgctaaaaagctctaccgagaagaaaaaagacgaactggaa
gagaacgccgaagagagcaaatcgaaatcggaagaggagctgaaagcaacgaaagatgat
gaagaaaagaaaaaggaatggtccaagaagctgcaggaagccgaagacaaatgtaaacat
atctcggacgagtacgaaacgtaccggaaggaacgaactgcgcacgagaagatgttgggc
gaggaagtggatagactgaggaaggaggcggaggcgaattcggcgagatgttgcaggttg
agagcgcagctggattctgcaaatgagagattcactcttctgcagggcaatgttgcttcc
tacaagtctcagatcaaggtccttgaagaaaaatgcaccaattacagcgtcactattggt
aaacacgagcagagcatcatgatcctgaaagacgagactctcgctgctcaaactcgcttg
tcgcgggccgaggttcagttggaaaacatacgtcaagagcgtcaaatgttgaaggattct
gaaggacgtctcctgaaggaacgcgaagtttatcaaagggagagacagactcaagtccta
cttaaagcagacatggaatccatcaaggccagtttggagcgagtccaggctgaaggacat
ctcagggctgagcagagactcgatgatgccaacagggagtgcgctgctcttcgccgtcgt
ctgcaagaggaacaggaccgcttcagggaactagcaggtcacttggaaagacaattggcg
accgatcgagagagattgaaggaagagcgcgagttatgcgagagactgaggacggagctc
gatcaactgagagaaactgacgctcaaaacagtcagaaaattgaggcactgaataacaaa
ctgcgccaggcagccactcattccatctctaagcccttgatgggagaggaaggtcttgtg
aagagaataaaagagttggagatgcaactgagtgcatcgcaagcggagatgaagtcattc
tccgaacaattaaagacagccagacaacagaatcagcagtactgtgacattgccgagagc
gcggaaacgcagctgagggagctgacagccgagtataacaagtgtaaagaggagctggaa
aatgctctgaaggaatcacgcgtggagattacttcgctgcagaagagggtgaaagatctt
agcgatgatctgtcaagggtgtcgaatggcaggcaagaaaccgacttggaactgagagag
agactggccgaggccgaaaggaaaatggaggagttggatgaattgaaaggcgaattagaa
ttgctgaagggcgacgtgaaaactgcgtctactgtagctaaagaggcggaagacaagtac
accagggagatgatgcaacactcggccgatttgcaaatcttagccaagctgaaggaggaa
gctcaagatttccagcaacggcttagcgttttgattcaagagcggaacgcagcggtggaa
gctctggaagttgagaaatcagcttcgaaagaaagagagcagaggtttgtgagcgagatt
gaagaaactcataagagaatcacagatctagatacacagaatgcgcttctgcataaccag
attcaggaattgggcgatagagtagccatcatgcagagccagcagactaagataagcgga
agggagagccccgacaccagtttggaaactttgaataaaagtttcacctctcttgaggaa
gattccaagtcagtggaacaattgttgcgggttatgaagtacctcagaagggagaaggat
ttagctttagcgaaatccgacgttcttagagcagaaaatctcagattgaagtcgcaggtc
gaggtggcagagaaacgattaaaggaaactgaaagtttgctgaattctgaacgagagaaa
tccgaggttgacgtgatgaccacctccaagcacgccgaattgttgcgcaaagtggagact
ttgaacgctattaccgattctaatcgcattcttagggaagaaagggatagtctgagcgca
aaagtcaacgaacttacggccaaggtcaacgctttatcggaagaagtagtgcctcttcgg
gatatatccagagatttgacagccaaaaccgaagctttggcagaagagaacaccagcttg
aagggcgaggcaaccagatggaggcaaagggcgaacacgctgttagaaagggcaaataaa
gccagccctgaagactggcgacgacttcagactgagagggagaatctcagcaaattgctg
acatcggaaagggagattcatgcgaagagaagtgaagagtttaatcaggtaaaagtggag
aaagcgaaactcgaagaacaactggtacagttgcaaaaacaaatacaaactcaggatgag
cagatgctgcgggcgtcggaagaggcacgcaaattgggccacgaacttaatgaggcatta
gccgactcatcctcaaaagtaaaggacttgatgttgctcaaaaaggaactagatgataag
gaaactgcactcagcgatattcgaagcaaagaaatgcaaattcgcagaatagccaagaag
tataagacgcaatttgaggaacttgcgagaagcgtcgaggaggagaaaaaccgcaatgag
ggaagtaggaacgagaacagttccgtaatcatgcaagaacgtgaagatcaactgagagag
gaaggccgtcaagaactccgccaggcaaacatcgaactgacgacgaaaatagacgaacta
acccatcaaataacggcggcccagaacgaaacggagactctgagaaaagaaatcgaagct
ataaaccgtagcagtatagagaaggaggagagggcaaaacaagttctgaaaggtgctagg
acgaaaattatgcagttgactgaatcgaagaagatgtgtgagaaagagctgttggatctg
aagtcgagattagaatccgctggcggtagcgcgggagttcaggatgacccggaaacggag
catgacgcgcgattggtggcgttgaagtcacagctggaagcccgcatctccagactggag
cacgagaaatccgagatacaggcggagaaagacacgctctcgcaacggattactcagctt
cagaggcagctatcgggagggagcggtgtcagcgccactacggagccgcctacggcgaac
attaagccgatgtctgctagagcagaaacacctctggcaagtatcagaccgatgagcgtc
gtggtacagtcaagaacggttgccgtgttgccgactactgccggcgcaccggtcatggtc
gcgccgcatcagatgcaacagcagcagcaacaagtggtacacactacggaaactagctcg
ccgactagcagtttgaccgactttcagccggcgagtacaagtagttcttcgcagagtgca
caaacgagtggccttcgtcagttggcagtacaaccacagttgagcgagtcggccgagtcg
acacagcgagaggaccccgagagcgccgaaacgttaaacgtgcagtcacaacagcagcaa
tgccagcaacaacagcagcagcagcaacaagcagtggcgctggtaagccctagggtggag
caacaacagcaacaacagcaggttgccgtcagcgatcaacaacagacagtggcgagcagt
tccacacagtcagtcagcacgtctcaagcttctacaggacttaagagacctcgagggttg
gattcgaccgcttctggctccggtatagttgaaggggtagatcatggacggcaggagcaa
ggacagagcccgaaaccaaaaagaagcagaccggatatcagcgcaactgcaagtgccagc
gcttcagaggtcgaataccaggtgcctacatcaagccagagggatcaagatgaagaagtg
gaggaaggctgtgtagtggtagtagattgcgatgaaggtgaaggtggcggaaatcaccag
acccaagaggaagaagaattcgataacgacacctacgaggagatggaagaagaggaagaa
atgccttacgaagttgaagttgaggttgaacgggacaataacgaggtggagattatcatg
gaggaggattccaccagcgttgaagttcctagacaaggtcaagcggcgattcctaccaat
caacaacagtctgaagcaatcagtagtgctggccccactggagaaccaccaacgtctttt
acagctagatcgtcgagaggaatcgcgcctatgcctagacaacagcaacagcaacatctt
cttttgccacaacaagggtacgaagatggcggcgacgactgtatcgtacctagtacgcct
actctctttgtgccacgtcgcgacggctttggggaagctgtgagctctccacaggttcct
cagggtcgttttaccttcggggatccatcggcgcccacaacagcttcctcaacgccgtct
ctaacgacacccactggctctgccaccagaaccatctttggttcatcaaattctgcagta
gctcaggttgtccaagaaagcttggacgatagtagaatggatttggcacagctcgaagat
ggcggtactggtcgtagcgtgcctacaacacctcttcaggtttcgccagctgcagatctg
ccaccttcgactagtagcagtcaagcggaagaacaagaaactactgcgtctgtagcaccc
atcactataacggctacttccggcgataacgttgaggagccgagcattccgagcatccgc
atcgtgggtgcggacgatcagcaacgcggttcaactgaagctacagaatccagtgcaacc
ccaagcgaaggagtgagttcggagggcgagaaacgatcagaagaaccagtggctctgaca
tccggtgaggatgattctgtggacacagcagaggcaacggaagaagccggaagcgagatc
gttgaagatgacgtcgaagaagagagccgtgaagcagaagcgtcaccgtctagtaacact
cgccagaggacaatggcagccagtctagcagctgcagctgcctccaacggtgccagagga
gtaactgtaagacgatcgccgagatcacccttccgagcagcgagaagcgctaggcctaca
ccgattgtatggggagaaagccagtcaggtagaggacaacccgtgctacgaggacattca
actagggggactaccaatgaaggtggacgaggacgaggaacccgaggtcgaagaatgcgt
gggaagtactcttatggtcgatattcataa
DBGET
integrated database retrieval system