Ooceraea biroi (clonal raider ant): 105282682
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Entry
105282682 CDS
T05778
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
3.6.4.13
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105282682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obo03041
]
105282682
Spliceosome [BR:
obo03041
]
Complex C
Other components
Step II factors
105282682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
nSTAND3
Snu56_snRNP
AAA_30
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
105282682
NCBI-ProteinID:
XP_011343181
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All DBs
Position
4:17266956..17271082
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AA seq
1200 aa
AA seq
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MEEVIKLEHLSLVSKICTELENHLGLNDKDLAEFIIHLAEKNNTFPAFKKVLIENGAEFS
DSFMANLLRIIQHMKPANVSPEKTSKLASKQDELALKFPALALPNEDVQHSSTNHAKDED
IVNDVMASLEAFAPSNKKQSTDNEKSKNGSDSGEKKSKREKRSKSRSRDRRRHRSRSSNR
KDRRRRSRSRSRHRSRDRTRRRRSGSRERRRSSSRDRRDSRYSRKRDKSRDRSRSVEESL
SLEPEVGKIYAGKVANIVPFGCFVQLEGLRRRWEGLVHISQLRREGRVANASDVVSRGQK
VLVKVLSVGGQKVSLSMKDVDQESGRDLNPVLPIVKAEEDEKHLRNPDRPTSLLELQGNY
DEDETYSRKRVQRLSSPEKWEIKQMLAASCIDRSELPEFDTETGILPREDDEEEDVEIEL
VEEEPPFLHGHGRALGDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQREQEMDSV
PTGLNKNWIDPLPEAESRTLAANMRGIGLQTQDLPEWKKHVIGGKKSSFGKKTNLTLLEQ
RQSLPIYKLRDDLVKAVTDNQILIVIGETGSGKTTQITQYLAEAGFTTRGKIGCTQPRRV
AAMSVAKRVAEEFGCCLGQEVGYTIRFEDCTGPETSIKYMTDGMLLRECLMDLDLKTYSV
IMLDEAHERTIHTDVLFGLLKQAVGRRPDLKLIVTSATLDAVKFSQYFFEAPIFTIPGRT
FEVEVMYTKEPETDYLDAALITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLG
PDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVK
QKVYNSKTGMDSLIVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEIQ
RTNLATTVLQLKTMGINDLLHFDFMDAPPVESLIMALESLHSLSALDNEGLLTRLGRRMA
EFPLEPNLSKMLIMSVHLQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQAEGD
HLTLLAVYNSWKNNKLSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKNTV
RIQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEY
MREVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggttataaaattggaacacttgtcgctggtttcgaaaatctgcaccgagtta
gaaaatcacttgggattaaatgacaaggatttagccgagtttattatacatttggctgag
aagaacaacacgttcccggcgttcaaaaaggtgttaatcgaaaatggggcagagttttca
gattcctttatggcgaatctcctcagaataatacagcacatgaaacctgccaacgtatct
ccggagaagacatcgaagctcgcgagtaaacaagacgaactggcgttaaaatttcctgca
ctggccttgccaaatgaggacgtgcagcattctagtacaaaccatgctaaagacgaggat
atcgttaacgacgttatggcgtctctggaagcattcgcaccgtccaacaagaaacagtcc
acagacaacgagaagagcaagaatgggagcgacagcggcgaaaagaagagtaagcgagag
aaaagaagcaaaagtagatcacgagacagaaggaggcacagatccagatcgtcgaaccgg
aaagacagacgacgtagatccaggtctcggtctcgtcacaggtcgcgtgacagaacacgc
aggagacgctccgggtcgcgagaacgtaggagatcatcgtctcgtgatcgcagagattca
aggtactcgaggaagcgcgataaatctcgcgataggtctagatccgtcgaggaatcgctc
tccttagaaccagaagtgggcaagatctatgcgggtaaagtcgcgaacatcgtgccgttc
ggctgcttcgttcagctggagggcctgagacgcaggtgggaggggctagttcacatctcc
caactgaggcgggaaggtcgagtggcaaatgcgagcgacgtggtttccagaggtcaaaag
gttctagtcaaggtgctcagtgtcggtgggcagaaagtgtctctgagtatgaaggacgtc
gatcaggagtcgggtagggatctgaatcctgtattgccaattgttaaagcggaagaggac
gagaagcacctgcgtaatccggacagacctacgtccttgttggagcttcagggcaattac
gacgaggacgagacgtactcgaggaaacgcgtgcagcgcttatcatcgccggagaagtgg
gagatcaagcagatgctggccgcgtcgtgcatcgacaggagcgagttaccggaattcgac
acggagaccgggattttaccgcgggaggacgatgaggaggaggacgtggagattgagctt
gtcgaggaggagccgccgtttctgcacggtcacggcagagcactgggcgacctcagcccc
gtgcggatagttaagaatccggacggctcgctggcacaagcggcaatgatgcagagtgcc
ttggcgaaggaacgacgggaacagaagatgctgcagcgcgagcaggagatggattccgtg
cctactggcttaaacaagaactggatagacccattgccagaggcggagagtcgtaccctg
gcagcgaacatgcgcggcatcgggctgcagacgcaggatctgcccgaatggaagaagcac
gtgataggcggcaagaaatcgtcgttcggaaagaagaccaatctgacgctgttggaacag
cgtcaaagcctgcccatctacaagctgcgcgatgatctagtaaaagcggtgacggataat
cagattctgatcgtcatcggggagaccggctcgggcaaaacgacgcagatcacgcagtat
ctggcggaggccggtttcaccacacgtggcaagatcggttgcacgcagcctcgacgagtg
gccgctatgagcgtggcgaaacgcgttgcggaagagttcggttgttgcttgggccaggaa
gtgggatacaccatccgtttcgaggactgcaccgggccagagaccagcatcaagtacatg
acagacggtatgctgttgcgcgagtgcctgatggacctcgacttgaaaacatactcggtg
atcatgctggacgaggcacacgagcgcactatccacacggatgtactgttcggcctgtta
aagcaggccgttggccgcaggcctgatctcaagctgatcgtcaccagcgctaccctggac
gcggtcaagttctcgcagtacttcttcgaagcaccaattttcaccatacccgggcgcacg
tttgaagtagaggtgatgtatacgaaggaacctgaaacggactacctggatgccgctctg
atcaccgtcatgcagatccatttgcgcgagccaccaggcgacatcctgctcttcctcact
ggccaggaagagatcgacactgcctgtgagatcctctacgaacgcatgaaatcgttgggt
ccagatgtcccggaactgatcattctaccagtttattcggctttgccttcggagatgcag
accaggatatttgagccagctccacccggttcgcgcaaggttgtcatcgccacgaatatc
gccgagaccagcctgacgatcgacggtatctactacgtcgtcgatccaggtttcgtcaag
cagaaggtctacaactctaaaaccggcatggacagtctcatagtcacaccgatcagtcaa
gcagcagcgaagcagcgcgccggcagagctggaagaaccggacccggaaaatgttacaga
ctctacaccgagcgagcctacagggacgagatgctgcccacgccggttccagagattcaa
cgaacaaacctggccactaccgtgctgcaactgaagacgatgggcatcaacgatctccta
catttcgatttcatggacgcgccgccggtggaatcactgattatggcactcgagtcactg
cacagtctgagcgcgcttgacaacgagggcctgcttacacgactgggtcggcgaatggca
gagttcccgctcgagccaaacctgtcgaagatgctgatcatgagcgtgcaccttcaatgt
tccgacgagattttaacaattgtcagtatgctgtccgtgcaaaatgttttctatcgaccg
aaggacaaacaggcattggccgatcagaaaaaagccaaatttaatcaggccgagggcgac
cacctgactctgttagcagtgtataattcttggaagaataacaagttgagtaacgcctgg
tgttacgagaacttcgtgcagatcaggacactgaaacgcgcacaggatgtacgcaagcaa
ctgctaggtataatggacaggcacaaattggacgtagtctcagccggcaagaatacagta
cgcatacagaaagcagtgtgctcgggattcttcagaaacgctgcgaagaaggatcctcag
gagggatacaggacattagtcgacagccaagtggtgtacattcatcctagtagtgcgtta
tttaatcgccagccggagtgggtaatttatcacgaactagtgcagactaccaaggaatat
atgagagaggtgacaaccatcgatccaaagtggctggtcgagttcgcgcccgcgtttttc
aagttcagtgatccgacgaagctcagcaagttcaagaagaatcagcgattagagccgctc
tacaataagtacgaggagccgaatgcgtggagaatatctcgggttcgcagacgacgcaat
taa
DBGET
integrated database retrieval system