Ooceraea biroi (clonal raider ant): 105287667
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Entry
105287667 CDS
T05778
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
105287667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obo03000
]
105287667
Transcription factors [BR:
obo03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
105287667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Motif
Other DBs
NCBI-GeneID:
105287667
NCBI-ProteinID:
XP_011351657
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All DBs
Position
5:complement(3299098..3305012)
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AA seq
1039 aa
AA seq
DB search
MGQSDDIEDSTYSRHQDLCQKLNMDATAASEAWKSYETIRQNYTLEGDQLHWIGCALYVA
CRRSSIPTVGQTGANVEGNCVSLTRLLQLCNLPLIQFFTKSKSWADMANMPQDFRAKIEK
LEGNFSVSMLIFKKYQPIFTDIFKDPKEDTSRPPRSRRHKAIPCTPARVFEFCWTLFICI
KGAIPDISDDLVNSYHLLLVCCDLIYSNALLANRKDLLNPHFPGLPENFCDESYTPPQTA
ECIVSLLCERHDAIPVEAKVIKEYCMKNYINKLFNEKVLRGDQSNFSGILEALNFDGNSK
AINKAYEQRLLSVGDFDERIFLADWRGVNLKKMSSVHVSDESGTESVDHLPGHDATDNIG
SPTQMMNIDEFHERLQMRREQPAGIQVSYLAPPTPLTGRKYLRSKDVSNITYNMNTATQS
VIKLQALLAGQNAPSEGLLQMLNSCSQDVKSLIEAKVKQIGDQFCANYNGIAVVGANDGP
MSDFGRKRFIMGQTLFYKLLEMILNDEKRKKPNYDITNLLSNELFIQCLLACCLEIVVFS
YKSNDKMFPWILKALNLDAYYFYKVIEIIVRTEDQLSREMVKHLNQIEEKILESLAWQSD
SPLWQTIESLPDGVPSCEEVSLPGTLETVDPNTPGQPVLRRITVERGSPHDVPQSPISSA
SERFQSPIQATPGVSKKRLFSDTRVTGQSVLRVGQSVLSSNRGMLIDNGQRILLVPDQIG
ASRASGAQASSNTIAQAANANSGKPRRTGSVALFFRKFYNLACVRMQDLCRSLEIPDADK
KKIWTIFEYSIKDRTELMKDRHLDQILMCAIYVICKLMKMEKNSFTEIMRCYRLQPQAES
HIYRAVFIKKVASDVDAKTGDNEKSADNSALTEKSTAPPTPTNMAGTSQNFNGEERGDLI
KFYNTVYVPQVKEFANKFGSARGSAMNLSLSPLPKGKPPASSPVRRVTGSIMTRTLDPKA
ISASPAPQLSYCFSRSPAKDLEAINKMMISVDARKTVGKRLLSDDMDVEIAENTSPKKTA
TFVARKLENIIGERRTQNQ
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggggcagtcggacgatattgaagactcgacgtacagtcggcaccaggatctctgccag
aagctgaatatggacgcgaccgccgcgtccgaggcctggaaatcctacgagaccattcgg
cagaattatacgctcgagggtgaccagttacactggataggatgtgcgctgtacgtagca
tgtaggagatcctcgatacccacagttggacagacgggtgctaatgtggagggaaactgc
gtttcgcttacgcgtcttctgcaactgtgcaatctcccattgatacaattcttcacaaag
agcaaatcatgggcagacatggccaatatgccacaggactttcgtgcaaagatcgagaaa
ctagagggaaatttctcagtgtcaatgcttatatttaaaaagtatcagccaatattcacc
gatatattcaaggatccaaaggaggacacctccagaccacctcggtccagaaggcacaaa
gcgataccttgcacacccgccagagtctttgaattttgttggacgttgtttatatgcata
aaaggtgcaattcccgacatctcggacgaccttgtcaactcttatcatctcttgttagtc
tgctgtgatctcatatatagcaatgctctgctggccaatagaaaagatttgctgaatcca
cattttcctggcttaccagaaaatttctgtgatgagagttatactccaccacagacggcg
gagtgcatcgtgagtttgctgtgcgaacgccatgatgcgatacctgtggaagctaaagtc
ataaaggagtattgcatgaagaattatatcaataagctgttcaatgagaaagtcctacgc
ggtgatcaatcgaatttctctggcatattggaagcgttgaactttgacggtaacagtaag
gctatcaacaaggcttacgagcaacgtctgttaagtgtcggcgactttgacgagagaata
tttttggcagattggaggggagtaaatttgaaaaagatgtcgagtgtgcacgtatctgat
gaaagcggtactgagtctgttgatcatttaccaggccatgacgctactgacaatatcggt
tcgcctacgcaaatgatgaacatagacgagtttcacgaacgattgcagatgagaagggaa
cagcctgccgggatacaggtttcgtacctggcacctcccacaccgctgactggtcgtaaa
tatctacgatcaaaggacgtatccaatataacgtataatatgaacacggcaactcagagc
gttattaaactgcaagctttgctagccgggcaaaacgcaccgagcgaaggtctactgcag
atgctgaacagttgctctcaggacgtcaagtctttaatcgaggcgaaagttaagcagatc
ggcgaccaattttgcgcaaattataacggcatagcggttgtcggtgcgaacgatggcccg
atgtccgatttcggaaggaagcggttcatcatgggacaaacgttgttctacaagcttctg
gaaatgattctaaatgacgagaagcgtaaaaaaccgaattatgatataactaatctccta
tcgaatgagctattcattcagtgcttgctcgcctgctgtctcgagatcgtcgtgttttcg
tacaagagcaacgataaaatgtttccttggatattgaaggctctaaatctggacgcgtac
tatttctataaagttatagaaattatagtgagaaccgaggaccagctatcgcgcgagatg
gttaagcacttgaatcagatcgaggagaagatcctggaatccctggcttggcagagcgac
agtccactgtggcagacaatagaatcgcttccggacggtgtgccaagctgcgaggaagtg
tccttacctggtactctggaaactgtcgatccgaatacgcctggccaacctgtactcaga
cgaataacggtagagcggggtagtcctcacgacgtaccacagagtccaatttcatctgct
tcagaaaggtttcaatctcccatccaggcaacaccaggtgtatcgaagaagcgattattc
tccgataccagagtcactggtcaaagtgtgctgcgagttggacagagcgtcttatcttcc
aatagggggatgctgatagacaatggccaaaggattctgttggtacctgatcagatcgga
gcctcaagagcgtcgggtgcacaagcctcgagtaataccatcgcacaagcggcgaacgcg
aactcgggcaaaccgaggcggactggttcagtcgcgctgttcttccgaaagttttacaat
ctcgcatgcgtgcgtatgcaggatttgtgtagatctctggagataccagacgccgataag
aagaaaatttggacgatctttgaatactcgatcaaggatcgtacggaactgatgaaggat
cggcatctcgaccagatcttaatgtgtgcaatttatgtaatatgtaaattgatgaagatg
gagaagaattcattcacggagattatgcgctgttatcgtctgcagccccaagcagagtcg
catatatacagagcggtgtttatcaagaaggtagccagcgacgtagacgcgaagacgggc
gacaacgagaaatcggcggacaatagtgcgctaacggagaagagcacggccccgccgact
ccgacgaacatggctgggacatcacagaattttaacggcgaagagcgtggcgatctgatc
aagttctacaacacggtgtacgtgccacaggtcaaagagttcgcgaacaaattcggatct
gctcgcggcagcgccatgaatctctcgctgagtccattaccgaaaggaaaaccgcctgcc
agttctccggtgaggcgcgttaccggtagtatcatgactcgcactctagacccgaaggcc
atcagcgcgtcgccggcgccacaattaagttattgcttcagtcgtagtcctgctaaggat
ttggaagccatcaacaagatgatgatatcagtggacgcgaggaaaaccgtaggaaagcga
ttgctctccgacgacatggacgtggagatagcagaaaacacgtctcccaaaaagactgcg
acgtttgtcgcacgaaaattagagaatattatcggggaacgacgaacgcagaatcagtaa
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