KEGG   Oryza brachyantha (malo sina): 102702680
Entry
102702680         CDS       T02995                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42
  KO
K12811  ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13]
Organism
obr  Oryza brachyantha (malo sina)
Pathway
obr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:obr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102702680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:obr03041]
    102702680
Enzymes [BR:obr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     102702680
Spliceosome [BR:obr03041]
 Complex A
  U2 snRNP components
   U2 related factors
    102702680
 Complex B
    102702680
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-GeneID: 102702680
NCBI-ProteinID: XP_015696029
UniProt: J3MQK7
LinkDB
Position
8:complement(2452977..2458192)
AA seq 1060 aa
MGSGDDVPSSKHHHRDKDKDRERSSSRHHRDKDRDRDRERSSSRHHHREERDDERDRDRE
RRHREKERDREERKAREREEREREKEEKERERARRREERDREERDRDRDRDRDRDRDRER
SRRRDAEEDEDDRDRKRRRRSSHHHRDAEPEGPPAAREEEEEVDEEEAERRRQKKKEEEQ
QQLDEEMETRRRRIKEWQEMKRREEETKRREQQESGVGTSAAATGADDGGNAGKKWTLDG
EESDEEGDKEDAKKSDDNGGSGAGIMDVDTQNGDSNANGATAMDEDDEIDPLDAFMNSMV
LPEVAKLESMPTANVDDKNDKSVKDAVTDGDKKGPKKVMGRIIQGEDSDSDYDDDVDDED
GSEDEDDEEFMKRVKKTKVEKLAIVDHSKIDYQPFRKNFYIEVKDITKMATEEVAAYRKQ
LELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMPIQAQALPIIMSGRDCIGIAK
TGSGKTLAFVLPMLRHVKDQPAVVPGDGPIGLIMAPTRELVVQIHSDIKKFSKVLGINCV
AIYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDM
GFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQLV
EVRPENERFLRLLELLGEWFDKGKILVFVHSQDKCDSLLKDLFQHGYPCLSLHGGKDQTD
RESTLADFKSNVCNLLIATSVAARGLDVKELELVVNYDVPNHYEDYVHRVGRTGRAGRKG
FAVTFISEEEERYAPDLVKALELSEQAVPEDLKSLADRFMAKVKQGTEQAHGTGYGGSGF
KFNEEEDEARKSAKKAQAREYGYEEDKSDSDSDEEGGVRKAGGDLAAQAIAAAQAAAALV
AAKAASNANQQTQGTAVGPLLPLAIASNAQNNEATARALQAAFNIQQNLARIQAHAVPEH
YEAELEINDFPQNARWKITHKETLGPIQEWTGAAITTRGTFIPQGKIVGANERKLYLFIE
GPTELSVKKAKAELKRVLEDCANHALNLPGSAQTGKYSVI
NT seq 3183 nt   +upstreamnt  +downstreamnt
atggggtctggtgacgacgtcccctcctccaagcaccaccaccgcgacaaggataaggac
cgcgaaaggtcctcctcccgccaccaccgcgacaaggaccgggaccgggaccgcgagcgc
tcgtcgtctcgtcaccaccaccgcgaggaacgggatgacgagcgggaccgggaccgggag
cgccgccacagggagaaggagcgggaccgcgaggagcggaaggcgcgggagcgggaggag
cgggagagggagaaggaggagaaggagagggagcgggcacggcggcgcgaggagagggac
cgtgaggagagggacagggacagggaccgggaccgggaccgggaccgggacagggagagg
tcgaggaggcgagacgcggaggaggacgaggacgatcgcgaccgcaagcgccgccgccgg
tcctcgcaccaccaccgcgacgcggagccggaggggccgcctgctgccagggaggaggag
gaggaggtggatgaggaggaggctgagagacggcgtcagaagaagaaggaggaggagcag
cagcagctggatgaagagatggagacgcggcggcgccgcatcaaggagtggcaggagatg
aagcgccgcgaggaggagactaagcgccgtgagcagcaggagtccggagttggcacttca
gctgccgccactggagcggatgatggtggcaatgccgggaagaagtggaccttggatggc
gaggagtccgatgaggagggggataaggaggacgctaagaagtcagatgataatggtggt
tctggtgctggtatcatggacgttgatactcagaatggggatagtaatgcaaatggcgcc
actgctatggatgaggatgatgaaatcgatccgcttgatgcattcatgaactcgatggtg
ttgccagaggtcgcaaagctggagagcatgcctactgccaatgtggatgacaagaatgat
aagagtgtgaaggatgctgtgactgatggggataagaaagggccgaagaaggtgatgggg
agaattattcaaggagaagactcggactcagattacgatgatgatgtggatgacgaggat
ggatcagaagatgaggacgatgaggagttcatgaaacgtgtcaagaagacaaaggtggaa
aagttggcaattgttgaccattctaagatcgactaccagccgttccggaagaatttttac
attgaggtgaaagacattacaaagatggccactgaggaagtggcagcttatcggaagcag
ttggagctcaaggtgcatgggaaagatgtacccaagccaataaagacatgggtgcagagt
gggcttaccagcaagctccttgatacaatcaagaaacttggttttgagaaaccaatgcct
atacaggcacaagcattaccaatcataatgagtggtcgtgattgtataggaatcgcaaag
actggatcaggcaagactcttgcatttgtcctaccaatgctgaggcatgtcaaagaccag
ccagctgttgtgcctggggatggcccaattgggcttataatggctcccactagagaactt
gtggttcagatacattcagacatcaagaagttctcgaaggtgcttggcatcaattgtgtt
gctatctatggaggttcaggggttgcccaacagattagtgaactgaagaggggtgcagaa
attgttgtttgtacaccaggaagaatgatcgatatcctttgcacaagcagtgggaagatt
actaaccttcggagagttacgttcttggtgatggatgaagctgataggatgtttgatatg
ggttttgagcctcagattactcggatagttcagaatacccgcccagataggcagacagtt
cttttctcagccacttttccacgtcaggtggagatactggcacggaaggtgctcaccaag
cctgttgagatccaggtgggcggaaggagtgtcgtcaacaaggatatcactcaactggtt
gaggtgcggccagaaaatgagaggttcttgaggctgttggagctgcttggagagtggttt
gataaaggcaaaattcttgtttttgtccattcacaagataaatgtgattctctactcaaa
gacctgttccagcatggatatccatgcctatctctgcatggtgggaaagaccagactgac
cgtgaatcaactcttgctgatttcaagagcaatgtatgcaacttgctgattgctaccagt
gttgctgctaggggtttagatgtcaaggagcttgagcttgttgtgaattatgatgtccca
aaccattatgaggattatgttcatcgtgttgggcgaactggccgtgctgggaggaaggga
tttgctgtgacttttatttctgaggaagaggagcgttatgctccagaccttgttaaagct
ttggagctctctgagcaggctgttccagaggaccttaaaagtctagctgatcgttttatg
gcaaaggtgaagcagggaacagagcaggcccatggaacaggttatggtggaagcggtttc
aagttcaatgaagaggaggatgaagcaaggaaatctgctaagaaagctcaggcaagggaa
tatggatacgaggaggacaaatcagattcagattctgatgaggaaggaggggttcgtaag
gcaggaggcgaccttgcggcacaagctattgctgctgctcaagctgctgctgctttggtt
gcagccaaggctgctagcaatgccaaccagcaaacacaaggcactgctgtagggcccttg
cttcctctagccattgcttcaaatgcacagaataacgaggccacagcacgtgcactgcag
gctgcatttaacatacagcaaaatctggctaggatacaagcacatgccgtcccagaacat
tatgaggctgagcttgaaattaatgacttcccacaaaatgcccgctggaagatcactcac
aaagagacattgggtcctatccaggaatggactggagctgcaatcactacaaggggaacg
tttattcctcaaggaaaaattgttggtgcaaatgagcgcaagctgtacctgttcatagag
ggccccactgagctatctgtcaagaaggcaaaagcagaattgaagcgtgtccttgaagat
tgtgctaaccatgctttgaaccttcctggttctgcccaaactggaaaatactctgttatt
tga

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