Oryza brachyantha (malo sina): 102719067
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Entry
102719067 CDS
T02995
Name
(RefSeq) replication factor C subunit 2 isoform X1
KO
K10755
replication factor C subunit 2/4
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03030
DNA replication
obr03410
Base excision repair
obr03420
Nucleotide excision repair
obr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102719067
03410 Base excision repair
102719067
03420 Nucleotide excision repair
102719067
03430 Mismatch repair
102719067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obr03032
]
102719067
03036 Chromosome and associated proteins [BR:
obr03036
]
102719067
03400 DNA repair and recombination proteins [BR:
obr03400
]
102719067
DNA replication proteins [BR:
obr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102719067
DNA Replication Termination Factors
ELG1-RFC complex
102719067
Chromosome and associated proteins [BR:
obr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
102719067
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102719067
Check point factors
HRAD17(Rad24)-RFC complex
102719067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RuvB_N
AAA_22
Mg_chelatase
AAA_assoc_2
AAA_14
AAA_5
AAA_11
AAA_24
AAA_16
DNA_pol3_delta
ResIII
SLFN-g3_helicase
AAA_2
nSTAND3
PhoH
AAA_19
AAA_30
AAA_23
IstB_IS21
AAA_25
AAA_28
AAA_7
Gp44_lid
bpMoxR
AAA_18
RNA_helicase
DUF3853
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
102719067
NCBI-ProteinID:
XP_040385375
LinkDB
All DBs
Position
12:3020131..3023922
Genome browser
AA seq
339 aa
AA seq
DB search
MAPLVPSSQPWVEKYRPRQVKDVAHQEEVVRVLTTTLQTADLPHMLFYGPPGTGKTTTAL
AIAYQLYGPELYKSRVLELNASDERGINVVRTKIKDFAAVAVGTARKGGYPCPPYKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMSN
RILHICNEEGVSLDAQALATLSSISNGDLRRAITYLQSAARLFGSSISSTDLISVSGAIP
EDVVKSLLASCKSGEFDVANKEVNNIIADGYPVSQLISQFLDVIVHADDIPDEQKARICK
KLGEADKCLVDGADEYLQLLDVASETIRALFDMPQTLVF
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgctcgtgccgtcctcgcagccatgggtggagaaataccggccgaggcaggtg
aaggacgtggcgcaccaggaggaggtggttcgcgtgctcaccaccaccctccagaccgcc
gacctgccgcacatgctgttctatggcccgcctggcaccgggaagaccaccaccgcgctt
gcaattgcttaccagctctacggtccagagctctacaaatcaagggttctagaacttaat
gctagcgatgagcgtggaattaatgtggtgaggactaagatcaaggactttgctgctgtc
gctgttggtactgcacgaaaaggtggttacccctgcccaccatacaagattattatacta
gatgaagcagattcgatgacagaagatgcccagaatgctttgaggcgtactatggaaact
tactccaaagtgacaagattctttttcatatgcaattacatcagcaggataatagaacca
cttgcatcaagatgtgcaaagtttagattcaagcctctttcagaagaagtaatgagcaat
cgtattttacatatatgcaacgaagaaggggtcagtcttgatgctcaggcattggccaca
ctaagctccatctctaatggtgacctccgtcgtgctataacctatcttcagagtgctgct
cgcttgtttggatcttctatttcttccaccgacttgattagtgtttcaggggctatccct
gaagacgttgtcaagtcattgcttgcgtcttgcaaatctggcgaatttgatgtggcaaac
aaggaagttaataatattattgcagatggatatcccgtttcacagttgatctcacagttt
ctagatgtgatagttcatgctgatgatattccagatgagcagaaggcaaggatatgtaaa
aagcttggggaagcagataagtgcttggtcgatggagcagatgagtatctacaacttttg
gatgtggctagtgagactatccgtgctctttttgacatgccacaaacgctggtcttctaa
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