Oryza brachyantha (malo sina): 102719384
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Entry
102719384 CDS
T02995
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
obr
Oryza brachyantha (malo sina)
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obr03032
]
102719384
03400 DNA repair and recombination proteins [BR:
obr03400
]
102719384
Enzymes [BR:
obr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
102719384
DNA replication proteins [BR:
obr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
102719384
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
102719384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-GeneID:
102719384
NCBI-ProteinID:
XP_015693329
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All DBs
Position
5:complement(2260259..2269919)
Genome browser
AA seq
885 aa
AA seq
DB search
MDDGATEGDVSADRVIAELLDMGFEFDKISQAIGVVGPRRADVLEFVLSDSGNGRRKPSR
ESQGRHSVSSNAEACSSGRHSVSSNMEARSSDDGNKLANRRRRLKQLSITDHLASNTGCE
KGSCGEKAITSYPYLVASNDPGVPISDDMCSALKPESQVLLANSRTESDRRDKISLVLQK
HFGFSCVKGFQQEALDAWCAHKDCLVLAATGSGKSLCFQIPALLTAKVVVVISPLISLMH
DQCLKLAKHGISACFLGSGQPDSRVEGKAMSGKYKIIYVCPETALRLMEPLKKLAENPGI
ALFAIDEVHCVSKWGHDFRPDYRKLSVLRENFSSSKLKFLEHDIPLMALTATATIPVRAD
IIKSLKMSEHTVIVLTSFFRPNLRFTVKHSRTSASAYGKDFRELIDTYSNSRNFMGKKQK
ALHEINPDSESSSYESPDDTMSDDEDTYVDSTSHVDNNFDKTKVGMPLRNENAENELDVY
PGVDDFDVTCGEFLECTQPENFASSSQSNKTSSSSSEIVDQGPTIVYVPTRKQTVELANY
LCKTGLRAAAYNAKMPKSHLRQVHEQFHCNALEVVVATIAFGMGIDKSNVRRIIHYGFPQ
SLEAYYQEAGRAGRDGKLADCTLYCNLMRAPTLLPNKRSGEQTKAAYRMLRDCFHYALNT
SVCRARILVKYFGEEFGPDRCHMCDICINGPPQMHDFKEEAVVFMNVLQAQSIQGQPAED
MGCSSIPRCISGRRRFGEVPNFRVVVSYIREKFPRFATTDRIWWEGLARILEAKGYIHDA
AETPRVLIQCPELTEAGLNFLSSQSEEEGLYAYPDAAILLAMNDPKPISTSSEWGRGWAD
PEIRRQRLAGKKMGRRKRKRHSRNQSTGFTTAKQRLAEILSKRRR
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggacgacggcgcaaccgaaggtgatgtgtccgccgaccgtgtcattgctgagttgctc
gacatggggttcgagttcgacaagatcagccaagcaatcggtgtggtcggccctcgccgc
gccgatgtgctggagtttgtgttgagtgattcaggcaacgggagaaggaagccgagtagg
gaatcacaaggccggcattctgtctcatctaatgcggaagcgtgctcgagtggccgacat
tctgtctcatctaatatggaagcgcgctcgagtgatgatgggaataaattggctaatcgc
aggagaagattaaagcagttgagcattactgatcatcttgcctcgaatactggctgtgag
aagggatcttgtggtgagaaagctattacatcgtatccctatttagtggcttccaatgat
cctggagtgccaatcagtgatgatatgtgttctgcattaaagcctgaatctcaggttttg
cttgctaattcaagaactgagtctgaccgcagagacaaaattagtcttgttctgcagaag
cactttggattttcctgtgtgaaaggattccaacaggaagctttggatgcttggtgtgct
cacaaggattgtcttgttctagcagcaacaggctcaggaaaatccctttgttttcagatc
ccggctcttctaactgcaaaggttgtggtggtgatttcacccttgattagtctaatgcac
gatcagtgtctgaaacttgcaaagcatgggatatcggcatgcttccttggttcagggcaa
cctgatagccgtgttgagggcaaagcaatgtctggcaagtacaagattatttatgtttgc
cctgagacagcattaagacttatggaaccattgaagaaacttgcagaaaatccagggatt
gcactttttgccattgatgaggttcactgtgtttctaaatggggccatgattttcgacct
gactacaggaaattgtctgttctccgagaaaatttcagttccagcaaattgaagttctta
gagcatgatattcctttgatggcattgactgctactgctaccattcctgtaagagcagac
attatcaagtcgttgaaaatgtctgagcatactgtgattgtcttgacatcttttttccgg
cctaatctccgattcactgtaaagcacagtagaacctcagcctccgcgtatggaaaggac
ttccgagaacttatagatacatatagcaattcaaggaattttatggggaagaaacagaaa
gctcttcatgaaatcaaccctgattctgagagtagttcatatgagtctccagatgatact
atgtcagatgacgaagatacatatgttgactccacgagccatgtagataataattttgat
aaaactaaagttggcatgcccttgagaaatgagaatgctgaaaatgagttggatgtatat
ccaggagtagatgattttgatgttacatgtggagagttcctcgagtgcacacagcctgag
aactttgcatcttcttctcaatccaacaaaactagttccagttcctcagaaattgttgat
caaggccctacaattgtttatgtacccacaaggaagcagactgtggagctagcgaactat
ttgtgcaaaaccggtctcagagctgctgcatataatgcaaagatgcctaaatcacatttg
aggcaggtgcatgaacagttccattgcaatgccttggaggttgtggtagctaccatagca
tttggcatgggaattgacaaatcaaatgtcaggagaattattcactatggtttcccgcag
agtttggaagcatattatcaagaagctggtcgtgctggtagagatgggaagttggcagat
tgcactctgtattgtaaccttatgagagcaccaacactccttcctaataaaagaagtggg
gaacagacaaaagcagcatacagaatgctacgtgattgctttcactatgctttgaacact
tcagtatgtagagccagaatattagtaaagtacttcggggaggaatttggtcctgatcga
tgtcacatgtgtgacatctgtattaatggccctcctcaaatgcatgatttcaaggaagaa
gcagttgtgtttatgaatgttctccaagctcaaagtatccagggacaaccagccgaagat
atgggctgcagcagtataccccgttgtatatctggaaggcgaaggtttggggaggttcct
aatttcagggtggtggtcagttatataagggagaagttccctagatttgccacaaccgac
agaatatggtgggaaggccttgctcgtatattagaagccaagggatacatacatgacgct
gctgaaactcctcgtgttttaatccagtgccctgagctgacagaggccggactgaacttt
ttgagttcgcaatcagaagaggaaggtttatatgcataccctgatgcagctattctattg
gcaatgaatgacccaaaacctatctctacatcctccgagtggggcaggggttgggcagat
cctgagatacgccgccagcgtttagcaggcaagaaaatggggagaagaaaacgaaagagg
cattctcggaaccagtctacaggtttcacaactgcaaaacagagattagctgaaatactc
tcaaaacgcagaagataa
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