Opitutaceae bacterium TAV5: OPIT5_17170
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Entry
OPIT5_17170 CDS
T03683
Name
(GenBank) crossover junction endodeoxyribonuclease
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
obt
Opitutaceae bacterium TAV5
Pathway
obt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
obt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OPIT5_17170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obt03400
]
OPIT5_17170
Enzymes [BR:
obt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
OPIT5_17170
DNA repair and recombination proteins [BR:
obt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OPIT5_17170
RecFOR pathway proteins
OPIT5_17170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
AHF91691
UniProt:
W0J4J4
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All DBs
Position
complement(3990392..3991003)
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AA seq
203 aa
AA seq
DB search
MARLSVRQMWAAKLAGKPLPAPSAVPSNGAATAAQAAFTAHRVPFSGQVLGIDPSLRGTG
LALVEFAPGRSPVLLRCQTLRVPARVPMSGALAEIHRTVTSFIADFSVRHVALEQTIYVQ
NFQTAQILGAARGAAIAAAAVMGKDIFEYAPLRVKQAVVGAGRASKEQMARTVMALLGHG
RPLASDEADAAGVALCHAYTWRE
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcacggctttcggtcagacagatgtgggcggcaaaactggcgggcaaaccgctgccg
gctccgtccgcggtgccgtccaacggagccgccaccgcggcgcaggctgccttcaccgcg
caccgcgtgccgttcagcggccaggtgctcggcatcgatccctcgctgcgcggcaccggg
ctcgccctggtggaatttgcccccggccgttcgcccgtgctcctgcgctgccagacgctg
cgggtcccggcgcgggtgccgatgtccggcgcgctggcggaaattcaccggacggtgaca
tcgttcatcgccgatttttccgtgcgccacgtggcgctggagcagacgatctatgtgcag
aacttccagacggcgcaaatcctcggcgcggcgcgcggagcggccatcgcagccgcggcg
gtgatgggaaaagacattttcgaatacgcgccgctccgcgtaaaacaggccgtggtcggc
gccggccgggccagcaaggaacaaatggcccgcaccgtcatggcgctgctcggccacggc
cgcccgctggcaagcgacgaagccgacgccgccggcgtggcgctctgccacgcctacacc
tggcgcgaatga
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