Afipia carboxidovorans OM5 (Mississippi): OCAR_6611
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Entry
OCAR_6611 CDS
T00783
Name
(GenBank) phage DNA Packaging Protein
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Terminase_6N
Terminase_6C
Motif
Other DBs
NCBI-ProteinID:
ACI93723
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All DBs
Position
complement(2547705..2549009)
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AA seq
434 aa
AA seq
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MSPTQRLYILARLNRDELEALHSDWQLFAHPHQWPPDLAANDKPWTTWLLIGGRGAGKTR
AGAEWIRAQALGLAPLAQQPAGRIALVGETEHDVREVMIEGVSGLLAVHRRDERPMWQPS
RRRLEWKNGAVAHAFSAEDPESLRGPQFACAWADELAKWRYAEAAFDMLQFGLRLGAQPR
QLITTTPRPTALIKRLLNDESCVTTRAATRSNALHLAPTFLQSVMARYAGTRLGRQELDG
ELIEERPDALWSRGLIETCRISEAPPLQRIVVAVDPPATSGKRADACGIVAAGVAADNGL
YVLADETLTQAAPAAWAARAVALWRRLEADALVVEVNQGGEMVRAVIAQVDPSVPVQPVR
ALRGKWLRAEPIATLYEQGRVRHAGVFAALEDEMCDFATSGLSSGRSPDHLDALVWALTA
LTHGAAVRPRVREL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgccgacgcaaaggctgtacatcctggcgcggctcaaccgcgatgaactcgaagcg
ctgcattccgactggcaactgttcgcgcatccgcatcaatggccgcccgatcttgccgcc
aatgacaagccgtggaccacatggcttctgatcggcgggcgcggcgcgggcaagacccgc
gcgggcgcggagtggatccgggcgcaggcgcttggcctcgcgccgctcgcgcaacagcct
gccgggcgcatcgcgctggtcggcgaaaccgaacatgacgtgcgcgaggtgatgatcgaa
ggcgtctccggtcttctcgccgtgcaccgtcgcgacgagcggccgatgtggcagccctcg
cgccgccggctcgaatggaagaacggcgcggtcgcccatgcattctcggcggaggacccg
gagagtttgcgcgggccgcaatttgcctgcgcgtgggcggatgaactcgccaaatggcgt
tacgcggaggcggcgttcgacatgctgcagttcggcctgcggctcggcgcgcagccgcgc
cagttgatcaccacgacgccgcggccgaccgcactgatcaagcgattgctgaacgatgag
agttgcgtgacgacgcgcgcggcgacgcgctccaatgcgctgcatctggcgccgacgttt
ctgcagagtgtgatggcgcgctatgccggcacgcggctcgggcggcaggagctcgacggc
gaactgatcgaggagcggcccgatgcgctgtggtcgcgcgggttgatcgaaacgtgtcgc
atcagtgaagcgccgccgttgcaacggatcgtggtggcggtcgatccgcccgccacctcc
ggcaagcgtgcggatgcctgcggcatcgtcgcggcgggagttgccgctgataacggtttg
tatgtgctggccgacgagacactgacgcaggccgcgccggcggcgtgggccgcccgggcg
gtggcgttgtggcgacggctggaagcggatgcgctggtcgtcgaagtcaaccagggcggc
gagatggtgcgcgcggtgatcgcacaggtcgacccgagcgtgccggtgcagccggtgcgg
gccttgcgtggcaagtggctgcgcgccgagccgatcgcgacattgtacgagcaggggcgg
gtgcgccacgccggcgtattcgccgcgctcgaggacgagatgtgcgacttcgcaaccagc
ggcttgagctccggccgctcgccggatcatctcgacgcgttggtctgggcgctcaccgca
ctcacccatggcgcggcggtgcggccgcgggtgcgggagctgtga
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