Afipia carboxidovorans OM5 (Mississippi): OCAR_7004
Help
Entry
OCAR_7004 CDS
T00783
Name
(GenBank) polynucleotide adenylyltransferase region
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Pathway
oca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OCAR_7004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oca03019
]
OCAR_7004
Enzymes [BR:
oca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
OCAR_7004
Messenger RNA biogenesis [BR:
oca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
OCAR_7004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
ACI94112
LinkDB
All DBs
Position
complement(2962147..2963415)
Genome browser
AA seq
422 aa
AA seq
DB search
MSESSRGSAAVIAGAWLTSGPAARVLALLNTEGEEARVVGGAVRNALLNLPVGEIDIATT
ALPEEVVRRARVARIKCVPTGLEHGTVTLVIEGTPVEVTTLREDIETFGRKAKVAFGRDW
ARDAERRDFTINGLSLSTDGTVHDYVGGLPDIAARRVRFIGDPARRIGEDFLRILRFFRI
HAAYGEGEPDQAARDACIAARDGLDLLSAERLRMEMLKLVVARGAADALVAMDDAGLLGR
ITAGVSYHGPFAGMVEAERMLGFVADPIRRLGALTVATPEDAKRLSTRLRLSNAETKRLD
SMGHRWWRMRGMDEEVARRRVYRLGADRYTERVMLAWARSGQDFSAPRWRDLATLTRRWT
APVFPLKAADFIARGLKEGPALGHVLTLAEDAWLAANFPLDAASLATIADQTLQRFRHDH
RL
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagagctcgcgcgggtcggctgcagtgattgcgggggcatggctcacatccggc
cccgcggcacgcgtgctcgcgctcctgaatactgagggtgaggaggcgcgggtcgtcggc
ggcgcggtgcgcaatgcgctcctcaatctgccggtcggcgaaatcgatatcgcaacaact
gcgttgcccgaagaggtcgtccgccgcgcgcgagtcgcacgtatcaaatgcgtgccgacc
gggctcgagcatggcaccgtgacgctcgtgatcgagggaacgccggtcgaggtcacgacg
ctccgcgaagatatcgaaaccttcggccgcaaggccaaggtggcgttcggccgcgactgg
gcgcgtgatgcggagcggcgcgatttcaccatcaacggcctgtcgctctctaccgatggg
accgtgcacgattacgttggcggccttcccgatatcgccgcgcggcgggtgcggttcatc
ggcgatccggcgcggcgtatcggcgaagatttcctgcgcattctgcgtttcttccgtatc
catgcggcttacggcgaaggcgagcccgatcaggctgcgcgcgatgcctgtatcgcagcg
cgcgatggtctcgatctgctgtcggccgagcggctgcgaatggagatgctgaagcttgtg
gtggcgcgcggcgcagccgatgccctcgttgcgatggacgatgccgggctgctcgggcgc
atcacggcaggcgtcagctaccatgggccatttgccggcatggtcgaggccgagcggatg
ctgggctttgtggccgatccgatccgccggctcggcgcgctcaccgttgcaacgccggaa
gacgccaagcggctctcgacgcggctgcggctctccaatgcggagacgaagcgcctcgat
tcgatggggcaccgctggtggcggatgcgcggcatggacgaggaggtggcgcgccgccgc
gtctatcgcctcggcgcggatcgctacaccgagcgcgtgatgctggcctgggcgcgttcg
ggtcaggatttttcggctccgcgctggcgcgatcttgcaacgttgacgcggcgctggact
gcgccggtgtttccgctcaaggcggcggacttcattgcgcgcggcttgaaagagggacct
gcacttggccacgtcctgacgcttgccgaggatgcgtggcttgccgcgaacttcccgctc
gatgccgcaagccttgccactattgcggaccagacgctgcaacgcttccggcacgatcac
aggctttga
DBGET
integrated database retrieval system
