Afipia carboxidovorans OM5 (Mississippi): OCAR_7773
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Entry
OCAR_7773 CDS
T00783
Name
(GenBank) sigma-24
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
oca
Afipia carboxidovorans OM5 (Mississippi)
Brite
KEGG Orthology (KO) [BR:
oca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oca03021
]
OCAR_7773
Transcription machinery [BR:
oca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OCAR_7773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
MarR_2
UPF0122
HTH_20
HTH_28
HTH_3
HTH_IclR
HTH_psq
HTH_24
SpoIIID
HTH_17
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ACI94868
LinkDB
All DBs
Position
3735350..3735937
Genome browser
AA seq
195 aa
AA seq
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MALSYESKEGEMTKESDLKELMAASLLGDSIAHRSLLTVLSGYLRSYYKSKLVRAGRTAE
EAEDLMQEALIVIHTQRHTYDPEQPLTPWLYAIARYKLIDHLRRTRASTASVPLENAENI
LASDDSVATESQFDLTRLLERLPERMRLSVQYVKLDGLSVAEAADRCGISKSAVKVNVHR
GLKILAASIARETKA
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
gtggctctctcatacgaatccaaagagggagagatgacaaaggagtctgacctcaaggaa
ctgatggcggccagtctcctgggagattctatcgcacatcgatcgttgctgacggtgttg
agcggatacttgcgaagctattacaagagcaagctcgtacgagccggacgcacggccgaa
gaagctgaggatctcatgcaggaggccttaattgtcatccacacgcagcgtcatacctac
gaccctgagcagccgctaacgccgtggctgtatgccattgcacgctacaagcttatcgat
catttgcggcgcacccgggcgtcgacggcgagcgtccctctggaaaacgccgaaaatatt
ttggcatctgacgacagcgtcgccaccgaaagccagttcgatcttaccaggctccttgaa
aggcttccggaaagaatgcgactttcggtccaatacgtgaagctcgacggcttaagcgta
gccgaagcagctgatcgttgcggaatatcgaaatccgccgtcaaagttaatgtgcaccgc
gggcttaaaatcctcgccgcttcgattgcacgggagacaaaagcgtga
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