Oceanicola sp. D3: FHY55_01370
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Entry
FHY55_01370 CDS
T06139
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
ocd
Oceanicola sp. D3
Pathway
ocd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FHY55_01370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocd03019
]
FHY55_01370
Enzymes [BR:
ocd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FHY55_01370
Messenger RNA biogenesis [BR:
ocd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FHY55_01370
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Ortholog
Paralog
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GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QDC07975
UniProt:
A0A5B8BQN6
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Position
complement(265379..266515)
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AA seq
378 aa
AA seq
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MTRLNAEWLAAPRPSALCAALEAAGHKALFVGGCVRNALLDVPVTDLDLSTDAHPETVTN
LAEGAGFRAIPTGIEHGTVTVVAGDVPIEVTTFRRDVSTDGRRASVAFSDDVAEDAARRD
FTMNALYCDMRGALEDPLNGLPDLEARRLRFIGNPADRIAEDYLRILRFFRFTAWYADPA
HGIDAEGLTACAAGADGLSHVSAERITSEILKLLAAANPAPAVASMDASGVLHRVLPGAD
APTLARFIHFAPTPDAIARLAALGGSREGLRLSRAEERRVETLLTAAASLAPPAALGYRF
GAEDGLAALYLRAAQIETIPPENAQSDVEFGASQTFPVTANDLMPELTGPALGARLKELE
ARWIASGFQLTRKELLAP
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcctcaacgcagaatggctcgcagccccccgccccagcgctctttgtgccgca
ctcgaagcggcaggccacaaggcactctttgtcggcggctgcgttcgcaacgctctgctt
gatgtgcctgtaacagatcttgatctgtccacggatgcgcacccagaaacagtcaccaat
ctagcggaaggggcagggtttcgagcaatccccaccgggatcgaacatggcacagtcact
gtggtggcgggcgacgtccctatcgaggtcacgaccttccggcgcgatgtttctactgac
gggcgccgcgcctcagtcgccttttccgatgatgtggccgaagatgccgctcggcgcgat
ttcaccatgaacgcgctctactgcgacatgcgcggcgcactggaagatccgctcaacggc
ctccccgatcttgaggcccgccgtctgcgcttcatcggaaacccggcagacaggatcgcc
gaagactatctgcgcatccttcgtttcttccgcttcaccgcctggtatgccgacccggcc
cacggcatcgacgccgaaggcctcaccgcctgtgccgccggggcagatgggctctcccac
gtttctgccgagcgcatcacaagcgaaatcctgaagctgctcgccgcggcaaacccggcc
cccgccgtcgcttcgatggatgcatcgggcgtgttgcatcgagtgttgcccggggcagac
gcccccacgctcgctcgcttcatccacttcgcccccacgcctgacgccatcgcccgcctt
gccgcgctgggcggaagccgtgagggcctgcgcctgtcgcgtgccgaagagcgccgcgtt
gaaaccttgctgacagccgccgccagcctcgccccgcccgctgcgctaggctaccgtttt
ggcgcggaagatggccttgccgccctctatctccgcgccgcgcagatagagactattccg
cccgaaaatgcgcaatcagacgtagaatttggcgccagccaaacctttcccgtcaccgcg
aatgacctgatgccagagctcaccggccccgcccttggcgctcggttgaaagagcttgaa
gcccgctggatcgcctccggtttccagctcacccgcaaagagttgctggccccctag
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