Oceanicola sp. D3: FHY55_05050
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Entry
FHY55_05050 CDS
T06139
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
ocd
Oceanicola sp. D3
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_16
HTH_29
HTH_23
HTH_28
Mg_chelatase
AAA_2
HTH_38
HTH_7
Motif
Other DBs
NCBI-ProteinID:
QDC08645
UniProt:
A0A5B8BSG7
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Position
complement(973455..974873)
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AA seq
472 aa
AA seq
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MTPVLLIEDVASMQLVYESVLKTAGHSVESASTAADGLQKFRQHRPGVVLVDLMLPDRDG
LELIEEFIAADPFTHVIVITANGSINRAVEAMRAGAWEFLVKPFDETRLLDAVSGATADH
ARATGQHNGNGHLTDPAPRLPAAEQTGLIGSSTPMREVMHKIGSVSRSMATVFISGESGT
GKELCARAVHDTSSRANGPFIALNCGAIPGDLLESEVFGHLKGSFTGALADKPGAAAAAD
GGTLFLDEICEMDLGLQTKLLRFLQTSTIQPVGSTKPRKVSVRILCATNRDPLSEVRAGR
FREDLYYRLHVVPLHLPPLRERGRDVIEIAHHALAEFAAEENKRFSRISPEVEELFCTLD
WPGNVRQLLNVLRNVVVLHDAEEVQLSMLPMELHHEVEARAEAARVAHRDAAERPAPGPE
LDGLIGKPMAEIERLVIEETIAREGGSVPRAARILQLSPSTIYRKREGWQKD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgacgcccgtgctgctcatcgaagacgtcgcgtcgatgcagttggtgtatgaatccgtg
ctcaagacggcgggccacagcgtggaaagcgcctcaaccgcggcagacgggttgcagaaa
ttccgacagcataggcccggagtggtgctggtggacctcatgctgcctgaccgcgacggg
ctggagctgatcgaggagttcatcgccgcagacccgtttacccatgtgatcgtcatcacc
gccaatggctcgatcaaccgcgcggtggaagcgatgcgcgcaggggcgtgggagtttttg
gtcaagccttttgatgagacccgcctgctcgacgcggtgtcgggcgccacggcagaccac
gcccgagccaccgggcagcacaatggcaacggccatctgaccgacccggcgccgagactg
cctgccgccgaacagaccggcctcatcggctcctccacaccgatgcgcgaggtgatgcac
aagatcggctcggtttcgcgctccatggccacggtgttcatctcgggcgaaagcggcacg
ggcaaggagctctgtgcccgcgcggtgcacgacacatcgtcccgcgccaatgggcctttc
atcgcgctgaactgcggggccattcccggcgacttgctggaaagcgaggtgtttggccac
ctcaagggcagctttaccggcgcgctggccgacaaaccgggcgctgctgcggcggcggac
gggggcacgctgtttctcgatgaaatctgcgagatggacctcgggctacaaaccaagctg
ctgcgctttctgcaaacctccaccatccagcccgtcggctccaccaagccgcgcaaggta
agcgtgcgcatcctttgcgccaccaaccgcgacccgctttcggaagtgcgtgcagggcgt
tttcgcgaggatctatattatcgccttcacgtggttccgctccacctgccgcccctgcgc
gagcgcgggcgtgacgtgatcgagattgcccaccatgcgctggcagaatttgctgccgaa
gagaacaagcgcttctcccggatttcgcccgaggtcgaagagcttttttgcacgctcgat
tggccgggcaacgtgcggcagttgctgaacgtgctgcgcaatgtggtggtgctgcatgat
gccgaagaggtgcagctttcgatgctgccgatggagcttcaccacgaggtggaagcccgg
gcagaagccgcgcgcgttgcccaccgggacgccgccgagcgccctgcccccggcccggag
cttgacgggctcatcggcaagccaatggcagaaatcgagcgcttggtgatcgaagagacc
atcgcgcgggaaggcggctctgtgcctcgtgccgcccgtatccttcagctttcgccctca
acgatctatcgcaagcgcgaaggctggcagaaggactag
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