Afipia carboxidovorans OM5 (Goettingen): OCA5_c00160
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Entry
OCA5_c00160 CDS
T01617
Symbol
miaB
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ocg03016
]
OCA5_c00160 (miaB)
Enzymes [BR:
ocg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
OCA5_c00160 (miaB)
Transfer RNA biogenesis [BR:
ocg03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
OCA5_c00160 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AEI04750
UniProt:
B6JCT6
LinkDB
All DBs
Position
16774..18195
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AA seq
473 aa
AA seq
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MTPPRKLHIKSYGCQMNVYDAQRMVDTLAPEGFVETADPAEADLVILNTCHIREKASEKV
FSELGRLRVIKEEAARTGREMKIAVAGCVAQAEGAEITRRASTVDVVVGPQSYHNLPKLL
AKARDGAPAIETEFPIEDKFSALPAPKPAAIRARGVSAFVTVQEGCDKFCTFCVVPYTRG
MEVSRPVADIVADAKRLAENGVRELTLIGQNVNAYHGDDENGRTSSLGRLLHRLAMLPGI
ARLRYSTSHPRDVDDSLIEAHRDIPAVMPFVHLPVQSGSDRILAAMNRKHTAADYIRTIE
RFRKVRPEIAFSSDFIVGFPGESEQDFADTLALVTQIGYAGAYSFKYSPRPGTPAADMQE
TDTALAVPAAVMDERLAQLQALIDAQQASFNRAAIGRTVEVLFERAAREPGQIVGRTAYL
QPAHVMASPDIIGKVLPVTIDSLERYSLKGRLASEETAVASLRSTQRESETFA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgccgcgcaagctgcacatcaagtcctacggctgccagatgaacgtctacgat
gcgcaacgcatggtggacacgctggcgcctgagggattcgtcgagacggccgatcccgct
gaggcggatctcgtcattctcaacacctgccacatccgcgagaaggcatcggagaaggtg
ttttccgagctcggccgcctgcgcgtgattaaggaagaggcagcgcgcaccgggcgcgag
atgaaaattgcggtcgccggatgcgtggcgcaggccgaaggcgcggaaatcacccgccgc
gcctcgaccgtcgatgtcgtggttggcccgcagagctatcacaatctgccgaagcttctg
gcgaaagctcgcgacggcgcgcccgccatcgaaaccgaattcccgatcgaggataagttt
tccgcgttgcctgcgccgaaacctgcagcgatccgcgctcgcggtgtctcggcctttgtc
accgtgcaggaaggttgcgacaaattctgcaccttctgcgtcgtaccctacacccgcggc
atggaagtctcgcgaccggttgccgacatcgtggccgatgcgaagcggcttgccgagaac
ggcgtgcgcgaactcacgctgatcggccagaacgtcaatgcctaccatggcgacgatgag
aacggccgcacctcttcgctcggccgcctgttgcatcgtcttgcgatgcttcccggcatc
gcgcggctgcgttattcgacaagccacccgcgcgacgtcgacgacagcctgatcgaggcc
catcgcgacatccccgcggtgatgccgttcgtacatctgccggtgcagtccggctcggac
cggattctcgcggcgatgaaccgcaagcacactgcggccgattacatccgcaccatcgag
cggttccgtaaagtgcgcccggagatcgcgttctcgtcggatttcatcgtgggttttccc
ggcgaaagcgagcaggactttgccgacaccctcgcacttgtcacgcaaatcggctacgct
ggcgcctattcgttcaagtattcgccccgtccgggtacaccggcggccgacatgcaggag
acggacacggctttggcggttccagcagcggtgatggacgaacgcctggctcagctccag
gccttgatcgacgcccagcaggcaagcttcaacagggccgcgatcggccgcaccgtcgag
gtgctgttcgagcgagccgcgcgcgaacccggccagatcgtcgggcgcaccgcttatctg
cagccggcacatgtcatggcctctcctgacatcatcggcaaagttttgccggtcacgatc
gacagcctcgagcgttacagtctcaagggccggcttgcctctgaggaaactgcggttgcc
tctctccgatccacgcaacgggagtctgaaacctttgcctaa
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