Oceanihabitans sp. IOP_32: FEZ18_12120
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Entry
FEZ18_12120 CDS
T06249
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
oci
Oceanihabitans sp. IOP_32
Brite
KEGG Orthology (KO) [BR:
oci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oci03032
]
FEZ18_12120 (gyrA)
03400 DNA repair and recombination proteins [BR:
oci03400
]
FEZ18_12120 (gyrA)
Enzymes [BR:
oci01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FEZ18_12120 (gyrA)
DNA replication proteins [BR:
oci03032
]
Prokaryotic type
DNA Topoisomerases
FEZ18_12120 (gyrA)
DNA repair and recombination proteins [BR:
oci03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FEZ18_12120 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DUF5748
Motif
Other DBs
NCBI-ProteinID:
QFZ55496
UniProt:
A0A5Q0JXP3
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All DBs
Position
2888136..2890691
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AA seq
851 aa
AA seq
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MAEGEKLIPINIEDEMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMHELGIRANS
AHKKSARIVGEVLGKYHPHGDKSVYDTMVRMAQEWSLRYMLVDGQGNFGSVDGDSPAAMR
YTEARMQKISEDFLADIDKETVEHKLNFDDTLQEPTVLPTRIPGLLVNGASGIAVGMATN
MPPHNLTEVVNGIIAFIDNNDIEIDELITHIKAPDFPTGGIIYGYDGVKEAFHTGRGRIV
MRAKANIEEINGRECIIVDEIPYQVNKAEMIKKTADLVNEKKMEGIASIRDESDRNGMRI
VYVLKRDAIPNIVLNKLYKYTALQSSFSVNNIALVDGRPQLLNLKDLIHYFVEHRHDVVV
KRTTYELRKAEERAHILEGLIIASDNIDEVIKIIRASSNADEARANLVERFKLSEIQAKA
IVEMRLRQLTGLEQDKLRTEYDALMITIEDLKDILDKKERRMDIIKSELEAVREKYGDER
RSTIEYAGGDLSIEDMIPDEKVVITISHAGYIKRTSLTEYKTQHRGGVGQKASTTRNEDF
LEHLFVGTNHQYMLFFTQKGKCYWMRVYEIPEGSKTSKGRAIQNLINIEQDDKVMAFICT
QDLKDEDYINSHYVIMATKKGQVKKTSLEQYSRPRANGINAITIKEGDVLLEAKLTTGES
QVMLALKSGKAIRFEEAKTRPMGRGASGVRGIRLQDEKTDEVVGMIAVDDMESDILVVSE
HGYGKRSSLDDYRITNRGGKGVKTISITEKTGNLVAIKNVTDEDDLMIINKSGIAIRMAV
KDLRVMGRATQGVKLINLKGNDTIAAVAKVMHDEEEVDIVENDDIIADSEDGTTLDNLDT
DSDQNENNSDN
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaggagaaaaattgattcctattaatattgaagatgagatgaaatcggcttac
attgattattcaatgtcggtcattgtgtcacgtgccttaccagatgtaagagatggttta
aagccagtacaccgacgtgtactttacggcatgcacgagttaggtattcgagctaattcg
gctcataaaaaatcagcaagaatagtaggtgaggttttaggtaagtatcaccctcatgga
gataaatcagtttacgataccatggttcgtatggctcaagagtggagtttgaggtatatg
ttggtagacgggcagggtaactttggatctgtagatggcgatagcccggcagcaatgcgt
tatacagaagcgcgaatgcaaaaaatttctgaagatttcttagcagatattgataaagaa
accgtagagcataagctaaattttgacgacacactgcaagagccaacagttttgcctact
cgcattcctggtcttttagttaatggggcctcaggtatcgctgtgggtatggcaaccaat
atgccaccacacaatttaacagaggttgtaaatggtattatcgctttcattgataataat
gacattgaaattgacgaattaataacccatatcaaggcgccagattttcctactggtggg
attatctatgggtatgacggtgttaaggaagcctttcatacaggtcgcgggcgtattgta
atgcgtgctaaggctaatattgaagaaataaatggtcgtgagtgtattatagtagatgag
attccgtaccaagttaataaggcagagatgattaaaaagactgccgacttggttaacgaa
aagaagatggaaggaattgcttccattcgtgatgaatcggacagaaatggaatgcgtatc
gtttatgttttaaagcgggatgccattccaaatattgttttaaacaaattatacaaatac
acggcattacaatcgtcttttagtgttaataatattgctttggtcgacggtcgtccacaa
ttattaaatctaaaggatcttattcattattttgttgagcatagacacgatgttgtggtt
aaacgaaccacttacgaattgcgtaaagctgaagaacgtgctcatatattagaaggttta
attattgcttcagataatattgatgaagttataaaaattattagagcctcttcaaatgcc
gatgaagccagagctaatttagttgagcgttttaaactttcagaaattcaggccaaagct
attgtagagatgcgtctgcgtcaattaacaggtttagagcaggataaattacgtacagag
tacgatgcgttaatgattaccattgaagatttaaaagatattctcgataaaaaagagcgt
agaatggacattattaagtcggaattggaagccgtaagagaaaaatacggcgacgagcgt
cgttctactatcgaatatgcaggtggcgatttaagtattgaggacatgattccagacgaa
aaagtagtcattacgatttctcatgcgggatatattaaacgtacctctttaacagaatac
aaaactcagcatagaggtggtgtaggccaaaaagcatctaccactcgtaacgaagatttc
ttagagcatttattcgtgggtaccaaccaccaatatatgttattctttacgcaaaaagga
aaatgttactggatgcgtgtttatgaaattccagaaggcagtaaaacctctaaaggtaga
gcgattcaaaatcttataaatatcgagcaggacgacaaagtgatggcttttatttgtact
caagacttaaaagatgaagattacataaacagtcattacgttattatggcaaccaaaaaa
ggacaggttaaaaaaacatccttagagcagtattctcgtccaagagctaacggtattaat
gccattactattaaagaaggcgatgttctattagaagcgaagttaaccacaggcgaaagt
caagtcatgttagctttaaaatctggtaaagccattcgttttgaagaagccaaaacaaga
cctatggggcgtggtgcatctggggttcgaggtattcgtttacaagacgaaaagactgat
gaggttgtaggtatgattgctgtagacgatatggaaagcgatattctagttgtttctgag
catggttatggtaagcgttctagcctagatgattaccgaattacaaatagaggcggaaaa
ggtgttaaaaccatttctattacagaaaaaaccggtaatttagtagctattaaaaacgtg
acagatgaagatgacttaatgataatcaataaatctggtattgctattagaatggcagtt
aaagatttaagagtgatgggaagagcgacacaaggggttaaattgattaaccttaaaggg
aacgatactattgcagcggttgctaaggtaatgcatgatgaagaagaggttgatatcgtt
gaaaacgacgatattatcgctgattctgaagatggcacaactcttgataatcttgatact
gatagcgatcaaaacgaaaataattcagataattaa
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