Oceanihabitans sp. IOP_32: FEZ18_12405
Help
Entry
FEZ18_12405 CDS
T06249
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
oci
Oceanihabitans sp. IOP_32
Brite
KEGG Orthology (KO) [BR:
oci00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oci03021
]
FEZ18_12405
Transcription machinery [BR:
oci03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FEZ18_12405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
Phage_antitermQ
DUF6240
Motif
Other DBs
NCBI-ProteinID:
QFZ55544
UniProt:
A0A5Q0JX13
LinkDB
All DBs
Position
complement(2955098..2955649)
Genome browser
AA seq
183 aa
AA seq
DB search
MKIQDAIKQAKQNDQKAFNYLLDRFWDSVYGFQLKRVENENDAEDITIQTFSKAFDKIDT
FDESYNFKTWLIAISKNIHIDLIRKKKRSISQVISRDNGDAFQVVDESPSPADKLITEQH
LAKLLRDIKKLKPHYQEVINLRYFQELSYKEISAELKEPINNVKVKLLRAKKLLAEIINK
SND
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaatacaagacgctataaaacaagctaaacaaaacgaccaaaaagcattcaattat
ctattggataggttttgggatagtgtttatggttttcaattaaaacgtgtagagaacgaa
aatgatgctgaagatatcaccattcaaaccttttctaaagcttttgataaaattgatact
tttgatgagtcctataattttaaaacctggttaattgccatttctaaaaacatacatatc
gatttgattcgcaagaaaaaacgttctatttctcaggttatttctagagataatggcgat
gcctttcaggttgtagacgaatcgccttccccagccgacaaactaattacagagcaacat
ttagccaaattactccgtgatataaaaaagctaaaaccgcattatcaagaagttataaac
ttaagatattttcaagaattgagttacaaagaaatttctgcagaacttaaagaacctata
aataatgtaaaagttaagttgttgcgagccaaaaaattattggcagaaataattaacaaa
agtaacgattaa
DBGET
integrated database retrieval system
