Oceanisphaera avium: CBP12_08355
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Entry
CBP12_08355 CDS
T04855
Name
(GenBank) L-seryl-tRNA(Sec) selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
ocm
Oceanisphaera avium
Pathway
ocm00450
Selenocompound metabolism
ocm00970
Aminoacyl-tRNA biosynthesis
ocm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ocm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
CBP12_08355
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CBP12_08355
Enzymes [BR:
ocm01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
CBP12_08355
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Gene cluster
GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
Cys_Met_Meta_PP
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ART80158
UniProt:
A0A1Y0CY22
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Position
1812862..1814307
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AA seq
481 aa
AA seq
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MAVSTVNISPTALNQPLAQPSDLPALDKVLHSQALAGALEQYGLSLVTQQLRLLLAKLRH
QALQQTLSINEVAVAAIAKQLLSQLQQLTASKLKTVINLTGTVLHTNLGRALLPESTVAA
ISQVLREPTNLEFDLVSGKRGDRDSLIEDLICELTGAEAATVVNNNAAAVLLMLNALANH
KQVIVSRGELVEIGGSFRIPDIMSSAGSTLVEVGTTNRTHYADYERAIGEHTAMLMKVHC
SNYAVVGFTKETPLTELVALGEHYQLPVTVDLGSGTLVDLSQWGLPHEPTVKETLAAGAD
LVTFSGDKLLGGPQAGFIVGRKALIEAIKKHPLKRALRVGKLTMAALESVLALYRSPELL
PQRLTTLHLLTRSAPDIQAQAQTLQPDLQHYLGEQYRVHCQAMFSQIGSGAMPIESLPSF
GLVIEYVGKKSSQIMQLERQFRSQTPPLIGRIHKDALYLDCRCLTPTQADLLQATWSQTS
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcagttagcacagtgaatatctctcccactgcgttaaatcagcccttagcacaaccg
tccgacttgccagcgctcgataaggtgcttcatagccaagcactggcgggcgcactagag
caatatggcttaagcttggtcacccagcagctacgtttattactggcgaagcttcgccac
caagcattacagcaaacactgagcataaatgaggtggcagtggccgcgattgctaagcag
ttattaagccagcttcagcaattaacagcgtctaaattaaaaacagtgattaacttaacc
ggcactgtattacataccaatttagggcgcgctttattacccgagtccaccgtagcagcg
attagccaagtgcttagagagcccactaatttggagtttgacttagtcagcggtaagcga
ggagatcgcgacagcctcattgaagacttaatttgcgagctcaccggggccgaagccgcc
actgtggttaataataatgccgccgctgtattactgatgcttaacgccttagccaatcac
aagcaagtgattgtctctcgtggtgagttagtggaaattggcggctcgtttcgtattccc
gatattatgagcagtgccggcagcaccttagttgaagtcggcactaccaaccgcactcat
tatgcagattatgagcgcgctatcggtgagcacaccgccatgctgatgaaagtgcactgt
agcaattatgccgtggtgggttttactaaggaaacccccctcaccgagctagtggcatta
ggagagcactatcaactacccgtcaccgttgatttagggagcgggactttggtcgactta
agccaatggggtttacctcatgagcccaccgttaaagaaaccctagcggcgggtgccgat
ttagtcacctttagtggcgataaattgttagggggaccgcaggcgggatttattgtgggg
cgtaaggcgctgattgaggcgattaagaaacatccccttaagcgcgcattaagagtgggc
aagctcactatggcggcactagagtcggtgttagcgctctatcgcagcccagagttgctt
ccccagcgactcaccaccttacacttactgactcgcagtgcgcccgatattcaagctcaa
gcccagacgttgcaacctgatttacagcactacttaggcgaacagtatcgcgtacactgc
caagccatgttcagccaaataggcagcggcgctatgcccatagaatcgctgccaagcttt
ggcttagtgattgagtatgtaggtaaaaaatcaagccaaattatgcagctagagcgccag
tttcgcagtcaaacgcccccccttattgggcgcattcataaagatgctctctatttagat
tgtcgctgcttaacgcctactcaagcggatttattacaagcaacttggagccaaacctca
ctatga
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