Oceanobacillus zhaokaii: CUC15_05720
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Entry
CUC15_05720 CDS
T05570
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ocn
Oceanobacillus zhaokaii
Pathway
ocn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CUC15_05720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocn03019
]
CUC15_05720
03400 DNA repair and recombination proteins [BR:
ocn03400
]
CUC15_05720
Enzymes [BR:
ocn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CUC15_05720
Messenger RNA biogenesis [BR:
ocn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CUC15_05720
DNA repair and recombination proteins [BR:
ocn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CUC15_05720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AXI08445
UniProt:
A0A345PEL5
LinkDB
All DBs
Position
1126338..1128317
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AA seq
659 aa
AA seq
DB search
MDSKVEQLFESYFPNLADKFSLRVIQKTATQNLLDGNNTLCIMPTSGGKSLIYWLSGLSL
QGITIVISPLIALIDEQASKISEQGYEVLTIHGGISPKKQVDLLKKLANKELNPKFIFIS
PERMATDGLFEYGMKKRKEDINLIAIDEIHCVSQWGVSFRPFYRRIPEFLNSVFNNNWPR
VLGLTATLNANEIKDICSSFHISRKNIIKDHLLVRSEIELKKIKFTNEDEKEEKLWDLLR
IHRNEKVLVYLYRKYNKRGTEDLMKTAIEKGYNAVNFHGEMSAKARQEIIQKFKNNDVDV
IFATNAFGMGIDIPDIRVVIHFMIPESVEQYYQEVGRAARDGEASNTYLLYTNKNIRVKK
THFIDRSFPSIDKLKDVFKKITGNKTNYKTLPYFNDEDVQLCLPYYLDNDILEIGAKGIT
TLDIFSEIKDPEIERLYNLTRTKGFISTVKKSGHSPKEVSDKVYSAIINEQVNLSKNLDK
SLIVRSKYTELKADQIKILEQYIEDKRTYKHKLLDYFTYLLEVCENSRELHQEIGRYLGV
DKHNLNKIYRTRKGDLVRSKSEVIIANLLYEANVNYEYEKKLYYDDQNWIEPDFTIEVGE
KDIYWEHLGMIGTETYDKRWLKKIDIYEKYYPDQLEITYENPALSDSARNIIEKIKVME
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggattctaaggttgagcaattatttgaaagttattttcctaatttagctgataaattt
tcattaagggtgattcagaaaacggctacacaaaatttgttagatggcaataatacactt
tgtattatgccaacaagtggtgggaaatctcttatatactggctgtctggattatcctta
cagggaattacaattgttatttctccattaattgctttaatagatgaacaagcaagtaaa
attagcgaacaaggttatgaagttttaactattcatggtggaatatctcctaagaaacaa
gtcgatttattaaagaaacttgctaataaagaattaaatcctaaatttatttttattagt
ccagaaagaatggcgacggatggactatttgaatatggtatgaagaagcgaaaagaagat
ataaacttaattgccattgatgaaatacactgtgtgagccaatggggagttagttttcga
cctttctataggcgaatcccagagttcttaaatagtgtttttaacaataattggcctaga
gtattaggtctaactgctactttaaatgctaatgaaattaaagatatatgtagttctttt
catatatccagaaagaatattataaaagaccaccttctagtacgctctgagattgaacta
aaaaagataaagtttactaatgaagatgaaaaagaggagaaactttgggatttgctacgg
attcatagaaatgaaaaagtattagtttatttgtatcgtaagtataataaaagaggtaca
gaagatttaatgaaaaccgctattgaaaaaggctataatgcggtgaatttccatggtgaa
atgtcagcgaaagctagacaagaaattattcaaaagtttaaaaataatgatgttgatgtt
atctttgcaaccaatgcttttggtatgggtattgatattcctgatattagggtcgttatt
cacttcatgattccagagtcggtggagcagtattatcaagaagttggaagagctgcaaga
gacggcgaagcttcaaatacgtacttactttatactaataaaaacataagagtgaagaaa
acacactttattgatcgttcttttccctctattgataagctaaaagatgttttcaaaaag
attactggaaataagacaaactataaaacactaccatattttaatgatgaggatgtacag
ctatgtctcccgtattatttggacaatgatatcctcgaaattggggctaagggtattacc
actctagatattttctcagaaataaaggatcccgaaatagaaagattatataatttaacg
aggactaaagggtttattagtactgttaaaaagagcgggcattctccgaaagaagttagt
gataaagtctattcagcaataataaatgaacaagttaatctttctaaaaatcttgataaa
agcctaattgtaagaagtaaatatacagaattaaaggctgaccaaattaaaatactggaa
caatacatcgaagacaagcgtacatataaacacaaacttttagattattttacatactta
ttagaggtgtgtgaaaattctagagaactccatcaagaaattggtcgatatttaggtgta
gataaacataaccttaataaaatttacagaacacgtaaaggagatttagttcggtcaaaa
tctgaagtaataattgcaaatcttctttatgaagcaaatgttaattatgagtatgaaaaa
aaactttattatgatgatcaaaattggattgaaccagactttacaattgaagtaggagaa
aaggacatatactgggaacatctcggtatgattggaactgagacttatgataaaagatgg
ttgaagaagatagatatttatgaaaaatattatccagaccaattagaaattacatatgaa
aacccagcgttgtctgattcagcacgaaatataatagaaaaaattaaagttatggaatga
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