Afipia carboxidovorans OM4: OCA4_c08320
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Entry
OCA4_c08320 CDS
T01967
Symbol
glcD1
Name
(GenBank) glycolate oxidase, FAD-binding subunit GlcD
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
oco
Afipia carboxidovorans OM4
Pathway
oco00630
Glyoxylate and dicarboxylate metabolism
oco01100
Metabolic pathways
oco01110
Biosynthesis of secondary metabolites
oco01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
oco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
OCA4_c08320 (glcD1)
Enzymes [BR:
oco01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
OCA4_c08320 (glcD1)
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Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
AEI01979
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Position
882013..883506
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AA seq
497 aa
AA seq
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MTIKMPAPDEGILARRDEIIAALREIVPGEGVIDSEREMMPYESDALTAYRQPPMVVVLP
DTTEQVAQVLKYCYDNGIRVVPRGNGTSLSGGSFPLADGVLLGLSKFKRVREIDFDNRVA
VVEPGMTNLAVSEAVAHEGFYYAPDPSSQIACSIGGNIAENSGGVHSLKYGLTTNNVLGC
EFVLITGEILRIGGRAPENDGYDLMGIITGSEGLLGVVTEITVRILKKPETARALMVGFA
EVEAAGECVARIIGAGIIPGGMEMMDKDAIHAAEAFVKAGYPLDVEALLIIELDGPSIEV
DELIRRVEAIALDCRSTTCQISNSEQERLLFWAGRKAAFPAVGRLSPDYLCMDGTIPRGK
LPEALAGIRELGKKYGLRCANVFHAGDGNLHPLILYDANVADEMQRAEDFGADILRLCVK
LGGVLSGEHGIGVEKRDLMPEMLSDIDLAHHQRIKCAFDAKGLLNPGKMFPTLHRCAELG
RMHVHGGKLPFPDIPRF
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcaagatgcctgcgcccgatgagggcattctcgcccgccgtgatgagatcatc
gctgccttgcgcgagatcgtgcccggcgagggcgtgatcgatagtgaacgggaaatgatg
ccctacgagtcggatgcactgaccgcctatcgtcagccgccgatggtcgtggtgctgccc
gataccactgagcaggtcgcgcaggtcctgaagtattgctacgacaacggcatccgcgtg
gtgccgcgcggcaacggcacctcgctgtcgggcggctcgttcccgcttgcggacggcgtg
ctgctcgggctgtcgaagttcaagcgcgtgcgcgagatcgattttgacaaccgcgtcgcg
gtggtcgagcccggcatgaccaacctcgcggtgagtgaggcggttgcgcatgagggcttc
tattatgcgccggacccgtcctcgcagatcgcctgttcgatcggcggcaacatcgcggag
aattccggcggcgtgcactccctgaaatacggcctcactaccaacaacgtgctgggctgc
gagttcgtgctgatcaccggcgagattctgcgcatcggcggccgcgcaccggagaacgac
ggctacgacctgatgggcatcatcacgggctcggaaggtcttctcggtgtcgtcaccgag
atcaccgtacgcatcctcaagaagccggaaaccgcacgcgcgctgatggtcggtttcgcc
gaagtggaagccgcgggcgaatgcgtcgcgcggatcatcggcgcgggcatcattcccggc
ggcatggagatgatggacaaggacgcgatccatgccgcggaagcgttcgtgaaggcgggc
tatccgctcgacgtcgaggcgctgctcatcatcgaactcgacggcccgagcatcgaggtc
gacgaactgatccgccgtgtcgaggcgatcgcgctcgattgccgttccaccacctgccag
atatcgaactccgagcaggagcggcttctgttctgggccgggcgcaaggccgcgttcccc
gcagttggtcggctgtcgccggattatctctgcatggacggcaccattccgcgcggcaag
ctgccggaagcgctcgccggcatccgcgagcttggcaagaaatacggcctgcgctgcgcc
aacgtgttccacgcgggcgacggcaatctgcatccgctgatcctgtacgatgccaacgtc
gctgacgagatgcagcgggcggaggatttcggtgccgatattctgcggctgtgcgtgaag
ctcggcggcgtcctcagcggcgagcacggcattggcgtcgagaagcgcgacctgatgccg
gaaatgttgagcgacatcgatctcgctcatcaccagcgcatcaagtgcgcgttcgatgcc
aaggggctgctcaaccccggcaagatgttcccgacgctgcatcgctgcgccgaactgggg
cggatgcatgtgcacggcggcaagctgccattccccgacattccgaggttctga
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