KEGG   Oligotropha carboxidovorans OM4: OCA4_c22100Help
Entry
OCA4_c22100       CDS       T01967                                 

Gene name
gatB
Definition
(GenBank) aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
oco  Oligotropha carboxidovorans OM4
Pathway
oco00970  Aminoacyl-tRNA biosynthesis
oco01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:oco00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    OCA4_c22100 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:oco03029]
    OCA4_c22100 (gatB)
Enzymes [BR:oco01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     OCA4_c22100 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     OCA4_c22100 (gatB)
Mitochondrial biogenesis [BR:oco03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    OCA4_c22100 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey
Motif
Other DBs
NCBI-ProteinID: AEI03336
LinkDB All DBs
Position
complement(2400219..2401703)
Genome map
AA seq 494 aa AA seqDB search
MNVIVDPKKLIKGATGDWEVVIGLEIHAQVTSNAKLFSGAATAFGGAPNEHVSLVDAAMP
GMLPVINAECVAQAIRTGLGLKAQINLKSTFDRKNYFYPDLPQGYQISQYKQPIVGEGVV
IVDIGDGESIEVGIERLHLEQDAGKSLHDQHPTMSFVDLNRSGVALMEIVSKPDMRSADE
AKAYVTKLRTILRYLGTCDGDMEKGNLRADVNVSVRHPGEPFGTRCEIKNVNSIRFIGQA
IDYEARRQIGILEDGGTIDQETRLYDPNKGETRSMRSKEEAHDYRYFPDPDLLPLEFTAG
YVEELKAKLPELPDEKRARFIADFGLTPYDAGVLVSERESADFYEAVLAKLADGTRDGKQ
AANWVINELFGRLNKEGVAIDASPVSADQLAAIVDLIGEGTISGKIGKDLFEIVWTKGGD
PKALVESLGLKQVTDLGAIEKMVDDIVAANPDKVAQARAKPQLIGWFVGQVMKLSGGKVN
PQAVNDLLKSKLGI
NT seq 1485 nt NT seq  +upstreamnt  +downstreamnt
atgaacgtaatcgtcgatcccaaaaagctcatcaagggcgccaccggcgactgggaagtc
gtcattggcctcgaaatccacgcccaggtcacctcgaacgccaagctgttctcgggtgcc
gcgaccgcattcggcggcgcgcccaacgagcacgtctcgctggtggacgcggcgatgccc
ggcatgctgccggtgatcaacgcggagtgcgtcgcgcaggcgattcgcaccgggctcggc
ctcaaggcgcagatcaacctaaagtcgaccttcgatcggaagaactatttctatccggat
ctgccgcagggctatcagatcagccagtacaagcagccgatcgtgggcgagggcgtcgtc
atcgtcgatatcggcgacggcgagagcatcgaggtcggcatcgagcggctgcatctcgag
caggatgccggcaagtcgctgcacgaccagcacccgaccatgtcgttcgtggacctgaac
cgctccggcgtcgcgctgatggagatcgtctccaagccggacatgcgctccgccgatgaa
gccaaggcctacgtcaccaagctgcggaccatcctgcgctatctcggcacctgcgacggc
gacatggagaagggtaacctgcgcgcggacgtcaacgtctcggtgcgccaccccggcgag
ccgttcggcacccgctgcgagatcaagaacgtcaactcgatccgcttcatcggtcaggcg
atcgactacgaggcgcgccgccagatcggtattctcgaagatggcggcaccatcgatcag
gaaacccgcctctacgaccctaacaagggcgagacgcgctcgatgcgctccaaggaagag
gcgcatgattaccgctacttccccgatcccgacctgttgccgctggaattcaccgcaggc
tacgtcgaggaactgaaagcgaagctgccggagctgccggacgagaagcgcgcgcgcttc
atcgctgatttcggcctcacgccttacgacgcgggcgttctcgtctccgagcgcgagagc
gccgacttctacgaagcggtgctggcgaagcttgcggacggcacgcgcgacggcaagcag
gccgccaactgggtgattaacgaactgttcgggcgcctcaacaaggaaggcgtcgccatc
gacgcgtcgccggtgtcggcggatcagctggccgcgatcgtcgatctgatcggtgaggga
acgatttccggcaagatcggcaaggatctgttcgagatcgtctggaccaagggcggcgat
ccgaaggcgctggtggaaagccttgggctgaagcaggtcaccgatctcggcgcgatcgag
aagatggtcgacgatatcgtcgccgccaatcccgacaaggtggcgcaggcgcgcgccaag
ccgcaactgatcggctggttcgttggtcaggtgatgaaattgtcgggcggcaaggtcaat
ccgcaggcggtgaacgacctgctcaagtccaaacttggcatctga

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