KEGG   Oligotropha carboxidovorans OM4: OCA4_c27210Help
Entry
OCA4_c27210       CDS       T01967                                 

Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase Ddl
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
oco  Oligotropha carboxidovorans OM4
Pathway
oco00473  D-Alanine metabolism
oco00550  Peptidoglycan biosynthesis
oco01100  Metabolic pathways
oco01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:oco00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    OCA4_c27210 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    OCA4_c27210 (ddl)
 09160 Human Diseases
  09175 Drug resistance: Antimicrobial
   01502 Vancomycin resistance
    OCA4_c27210 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:oco01011]
    OCA4_c27210 (ddl)
Enzymes [BR:oco01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     OCA4_c27210 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:oco01011]
 Precursor biosynthesis
  Amino acid ligase
   OCA4_c27210 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp_3 GARS_A CPSase_L_D2 NAD_binding_8
Motif
Other DBs
NCBI-ProteinID: AEI03839
LinkDB All DBs
Position
complement(2900675..2901601)
Genome map
AA seq 308 aa AA seqDB search
MTALQHVAVLMGGWSSEREVSLRSGAACAAALERKGYRVTRIDVQRDIATVLQNLKPDVA
LVMLHGKPGEDGTIQGVLETLGIPYSHSGVLSSSLAMRKDLAKTVMATAGVPVAEGLTLT
RAEIAKAHVMAPPYVIKPVADGSSVGVFIVTEDQAHPPQELFRDDWPHGEELLVEKYIAG
RELTCAVIKGEASDVIEIVPLLKFYDYEAKYSKGASKHVLPAPVLPFVYQEVRRLTLAAH
GALGCRGVSRADFRYDDRIEGTGGLVCLEVNTQPGMTETSLVPELAGYAGVAFDELVQWM
VEDASLDR
NT seq 927 nt NT seq  +upstreamnt  +downstreamnt
atgacagcccttcaacacgttgccgtcctgatgggcggatggtcttccgaacgcgaggtc
tcgctgcgctcgggcgcggcctgcgccgcggcgctggagcgcaagggctatcgcgtgacg
cgcatcgacgtgcagcgcgacatcgcaaccgttctgcaaaatctcaagccggacgtcgcg
ctggtgatgctgcatggaaagccgggcgaggacggcaccattcagggcgtgctggaaacg
ctcggcattccctacagccattccggcgtgctctcgtcctcgcttgcgatgcgcaaggac
ctcgccaagacggtgatggcgaccgcgggcgtgccggtcgcggaaggcctgacgctgacg
cgcgcggaaattgcgaaggcgcatgtgatggcgccgccttacgtcatcaaaccggtggcg
gacggctcgagcgtcggggttttcatcgtcaccgaggatcaggcccacccgccgcaggag
cttttccgggacgactggcctcacggcgaggagcttctggtcgaaaaatacatcgccggg
cgtgaactcacctgcgccgtcatcaagggcgaggcgagcgacgtgatcgagatcgttcct
ctgttaaaattttatgattacgaggcaaagtattcaaaaggcgcgtcaaaacacgttctg
cccgcacctgttttaccatttgtttaccaggaagtccgaaggttgacgctggccgcgcat
ggggcgcttggctgtcggggagtaagtcgggcggatttccgttacgacgatcgcatcgag
gggacgggtggtctcgtctgtctcgaggtgaatacccaacccggcatgaccgagacgtca
cttgttccagagcttgcaggatatgcgggcgttgcatttgacgagttggttcaatggatg
gtggaggacgcctctctcgatcggtga

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