Octadecabacter sp. SW4: FTO60_12180
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Entry
FTO60_12180 CDS
T06209
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
oct
Octadecabacter sp. SW4
Pathway
oct03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FTO60_12180 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oct03400
]
FTO60_12180 (ruvB)
Enzymes [BR:
oct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FTO60_12180 (ruvB)
DNA repair and recombination proteins [BR:
oct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FTO60_12180 (ruvB)
RecFOR pathway proteins
FTO60_12180 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_22
AAA_16
Rad17
AAA_3
AAA_14
AAA_2
RNA_helicase
TsaE
AAA_33
nSTAND3
AAA_17
AAA_28
AAA_18
NACHT
NB-ARC
ABC_tran
Parvo_NS1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QEE36402
UniProt:
A0A5B9EU60
LinkDB
All DBs
Position
complement(2466523..2467539)
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AA seq
338 aa
AA seq
DB search
MTEPDPTLRPERLSEDHDRALRPQVLDEFIGQAEARANLKVFIESARKREVAMDHTLFHG
PPGLGKTTLAQIMARELGVGFRMTSGPVLAKAGDLAAILTNLEARDVLFIDEIHRLNPAV
EEVLYPALEDFELDLVIGEGPAARTVRIELQPFTLIGATTRMGLLTTPLRDRFGIPTRLE
FYNVKELHEIVTRGARLMGAPATPDGAQEIARRARGTPRIAGRLLRRVVDFAVVEGDGTV
THDIADRALTRLGVDHLGLDGADRRYLRLIAENYQGGPVGIETLSAALSESRDALEEVIE
PFLLQQGLIQRTPRGRMLAQKAWTHLGMDAPRPGDLFE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacccgacccaaccctgcgccccgagcgtctgtccgaagatcacgaccgtgcc
ttgcggccacaggttctggacgaatttatcggtcaggccgaggcccgcgcgaacctcaag
gtgttcatcgaaagtgcgcgcaagcgcgaggtggcgatggaccacacgttgtttcatggt
ccccccggtctgggcaagaccacgctggcgcagatcatggcgcgcgaattgggcgtgggg
tttcgcatgacatccggtccagttctggccaaggcgggcgatctggcggcgatcctgacc
aatctggaagcgcgcgatgtgttgtttattgacgaaatccaccggcttaatccggcggtg
gaggaagtgctttatcccgcgctcgaggatttcgaactggatctggtgatcggcgaaggc
cctgccgcgcgcaccgtgcgcattgaattgcagcccttcaccttgatcggggcgaccacc
cgtatgggcctgctgaccacgccactgcgcgatcgtttcggcatcccgacgcggcttgag
ttttataacgtcaaagagctgcacgagatcgtcacgcgcggtgcccgcctgatgggtgcg
cccgccacacccgatggtgcgcaggaaatcgcccgtcgcgcccgtggcacgccgcgcatc
gccgggcgtttgctgcgtcgtgtcgtcgattttgcggtggtcgaaggggacggcaccgtg
acccatgacatcgccgaccgcgccctgacgcgtctgggagttgaccatctggggctggac
ggcgcggatcgccgctacctgcgcctgatcgccgaaaattatcagggcggccctgtgggg
attgaaaccctgtctgccgcgctctcggaaagccgcgatgcgcttgaagaagtgatcgag
ccgttcctgttgcagcagggtctgatacagcgcactccgcgcgggcggatgctggcgcaa
aaggcctggacccatctggggatggatgcgccacggcccggcgatttgtttgaatga
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