Entry
Name
Endocytosis - Oryctolagus cuniculus (rabbit)
Description
Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.
Class
Cellular Processes; Transport and catabolism
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Oryctolagus cuniculus (rabbit) [GN:
ocu ]
Gene
100358165 zinc finger FYVE domain-containing protein 16 isoform X1 [KO:K04679 ]
100356819 zinc finger FYVE domain-containing protein 9 isoform X1 [KO:K04679 ]
100357864 SH3 domain-containing kinase-binding protein 1 isoform X1 [KO:K12470 ]
100350663 epidermal growth factor receptor substrate 15 isoform X1 [KO:K12472 ]
100352462 epidermal growth factor receptor substrate 15-like 1 isoform X1 [KO:K12472 ]
100344359 actin-related protein 2/3 complex subunit 5-like protein [KO:K05754 ]
100358641 WAS/WASL-interacting protein family member 2 isoform X2 [KO:K19475 ]
100358527 WAS/WASL-interacting protein family member 3 isoform X1 [KO:K19475 ]
100355833 LOW QUALITY PROTEIN: WAS/WASL-interacting protein family member 2-like [KO:K19475 ]
100355560 putative tyrosine-protein phosphatase auxilin isoform X1 [KO:K09526 ]
100358123 vacuolar protein sorting-associated protein 29 isoform X2 [KO:K18467 ]
100341202 vacuolar protein sorting-associated protein 26A isoform X1 [KO:K18466 ]
103347003 LOW QUALITY PROTEIN: hepatocyte growth factor-regulated tyrosine kinase substrate [KO:K12182 ]
100350629 vacuolar protein sorting-associated protein 28 homolog isoform X1 [KO:K12184 ]
100347127 vacuolar protein sorting-associated protein 37A isoform X1 [KO:K12185 ]
100347637 LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 37B [KO:K12185 ]
100340347 vacuolar protein-sorting-associated protein 36 isoform X1 [KO:K12190 ]
100340140 vacuolar protein sorting-associated protein 4A isoform X1 [KO:K12196 ]
100343960 LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 4A-like [KO:K12196 ]
127489134 vacuolar protein sorting-associated protein 4A isoform X1 [KO:K12196 ]
100352012 vacuolar protein sorting-associated protein VTA1 homolog isoform X1 [KO:K12199 ]
100341540 programmed cell death 6-interacting protein isoform X1 [KO:K12200 ]
100354611 H-2 class I histocompatibility antigen, Q10 alpha chain isoform X4 [KO:K06751 ]
100338822 RLA class I histocompatibility antigen, alpha chain 11/11 [KO:K06751 ]
100349085 RLA class I histocompatibility antigen, alpha chain 11/11 [KO:K06751 ]
100339821 LOW QUALITY PROTEIN: RLA class I histocompatibility antigen, alpha chain 11/11 [KO:K06751 ]
100348995 RLA class I histocompatibility antigen, alpha chain 11/11 isoform X16 [KO:K06751 ]
100355380 patr class I histocompatibility antigen, A-2 alpha chain isoform X2 [KO:K06751 ]
100349247 HLA class I histocompatibility antigen, B alpha chain isoform X2 [KO:K06751 ]
100349757 RLA class I histocompatibility antigen, alpha chain 11/11 [KO:K06751 ]
100328967 RLA class I histocompatibility antigen, alpha chain 19-1 precursor [KO:K06751 ]
100353577 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K12488 ]
100346808 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12488 ]
100359279 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12488 ]
100359236 arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K12489 ]
100008949 ACAP2; arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 [KO:K12489 ]
127489269 arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12489 ]
100341403 arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1 [KO:K18439 ]
100352233 arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K18440 ]
100354264 arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12490 ]
100344961 LOW QUALITY PROTEIN: arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 [KO:K12491 ]
100351262 arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12491 ]
127493716 arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 isoform X1 [KO:K12491 ]
100346056 arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 isoform X1 [KO:K17848 ]
100339132 ADP-ribosylation factor GTPase-activating protein 1 isoform X1 [KO:K12492 ]
103347442 LOW QUALITY PROTEIN: ADP-ribosylation factor GTPase-activating protein 3 [KO:K12493 ]
100351722 ADP-ribosylation factor GTPase-activating protein 2 isoform X1 [KO:K12493 ]
100347994 ADP-ribosylation factor GTPase-activating protein 2-like [KO:K12493 ]
100349763 ADP-ribosylation factor GTPase-activating protein 2-like [KO:K12493 ]
100341977 IQ motif and SEC7 domain-containing protein 2 isoform X1 [KO:K12495 ]
100353775 IQ motif and SEC7 domain-containing protein 1 isoform X12 [KO:K12495 ]
100352582 IQ motif and SEC7 domain-containing protein 3 isoform X1 [KO:K12495 ]
103352390 brefeldin A-inhibited guanine nucleotide-exchange protein 2 isoform X1 [KO:K18442 ]
100345151 brefeldin A-inhibited guanine nucleotide-exchange protein 1 [KO:K18442 ]
100344254 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1 [KO:K18443 ]
Compound
C04549 1-Phosphatidyl-1D-myo-inositol 3-phosphate
C04637 1-Phosphatidyl-D-myo-inositol 4,5-bisphosphate
C05981 Phosphatidylinositol-3,4,5-trisphosphate
C11556 1-Phosphatidyl-1D-myo-inositol 3,5-bisphosphate
Reference
Authors
Acconcia F, Sigismund S, Polo S
Title
Ubiquitin in trafficking: the network at work.
Journal
Reference
Authors
Donaldson JG, Porat-Shliom N, Cohen LA
Title
Clathrin-independent endocytosis: a unique platform for cell signaling and PM remodeling.
Journal
Reference
Authors
Sorkin A
Title
Cargo recognition during clathrin-mediated endocytosis: a team effort.
Journal
Reference
Authors
Raiborg C, Stenmark H
Title
The ESCRT machinery in endosomal sorting of ubiquitylated membrane proteins.
Journal
Reference
Authors
Scita G, Di Fiore PP
Title
The endocytic matrix.
Journal
Reference
Authors
Le Roy C, Wrana JL
Title
Clathrin- and non-clathrin-mediated endocytic regulation of cell signalling.
Journal
Reference
Authors
Jovic M, Sharma M, Rahajeng J, Caplan S
Title
The early endosome: a busy sorting station for proteins at the crossroads.
Journal
Reference
Authors
Pietiainen VM, Marjomaki V, Heino J, Hyypia T
Title
Viral entry, lipid rafts and caveosomes.
Journal
Reference
Authors
Grant BD, Donaldson JG
Title
Pathways and mechanisms of endocytic recycling.
Journal
Reference
Authors
Cullen PJ, Korswagen HC
Title
Sorting nexins provide diversity for retromer-dependent trafficking events.
Journal
Related pathway
ocu04060 Cytokine-cytokine receptor interaction
ocu04070 Phosphatidylinositol signaling system
ocu04130 SNARE interactions in vesicular transport
KO pathway
LinkDB
All DBs