Oryctolagus cuniculus (rabbit): 100101587
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Entry
100101587 CDS
T03373
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-4
KO
K06525
integrin beta 4
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04151
PI3K-Akt signaling pathway
ocu04510
Focal adhesion
ocu04512
ECM-receptor interaction
ocu04810
Regulation of actin cytoskeleton
ocu04820
Cytoskeleton in muscle cells
ocu05165
Human papillomavirus infection
ocu05410
Hypertrophic cardiomyopathy
ocu05412
Arrhythmogenic right ventricular cardiomyopathy
ocu05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100101587
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100101587
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100101587
09142 Cell motility
04820 Cytoskeleton in muscle cells
100101587
04810 Regulation of actin cytoskeleton
100101587
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100101587
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
100101587
05412 Arrhythmogenic right ventricular cardiomyopathy
100101587
05414 Dilated cardiomyopathy
100101587
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ocu04147
]
100101587
04515 Cell adhesion molecules [BR:
ocu04515
]
100101587
04090 CD molecules [BR:
ocu04090
]
100101587
Exosome [BR:
ocu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
100101587
Exosomal proteins of bladder cancer cells
100101587
Cell adhesion molecules [BR:
ocu04515
]
Integrins
Integrin beta subunits
100101587
CD molecules [BR:
ocu04090
]
Proteins
100101587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Integrin_B_tail
Calx-beta
Pur_ac_phosph_N
PSI_integrin
I-EGF_1
EGF_2
SEA
Motif
Other DBs
NCBI-GeneID:
100101587
NCBI-ProteinID:
XP_051694372
Ensembl:
ENSOCUG00000014951
LinkDB
All DBs
Position
Unknown
AA seq
1818 aa
AA seq
DB search
MARPRPSPWARLLLAALLSACLPGDMANRCKKAQVKSCTECIRVDKDCAYCTDEMFTERR
CNTPAELLAAGCRQGSVVIMESSFQITEESQIDTELRRSQVSPQGMYIRLRPGEERHFEL
QVFEPLESPVDLYILMDFSNSMSDDLDNLKQMGSNLAQVLSKLTSDYTIGFGKFVDKVSV
PQTDMRPEKLKEPWPNSDPPFSFKNVISLTKDADEFRDKLQGERISGNLDAPEGGFDAIV
QTAVCTRAIGWRPDSTHLLVFSTESAFHYEADGANVLAGIMNRNDEKCHLDATGTYTQYG
TQDYPSVPTLVRLLAKHNIIPIFAVTNYSYSYYEKLHTYFPVSSLGVLQEDSSNIVELLE
EAFNRIRSNLDIRALDSPRGLRTEVTSKMFQKTKTGSFHIRRGEVGTYLVQLRAAEDVDG
KHVCQLPEEDQKGNVHLKPSFSDGLRMDVGIICDTCACELEKEVRSARCDFHGDFMCGHC
VCDEGWSGSTCTCATGSLSDIEPCLRDGEDKPCSGRGECQCGRCVCYGEGRYEGQFCEYD
NVQCPRTSGVLCNDRGRCSMGQCVCEPGWTGPSCDCPLSNATCIDSHGGICNGRGYCECG
RCHCHQQSLYTDTICEINYSLIPLGLCEDLRSCVQCQAWGTGAKKGRTCEECSFKVKMVD
ELKRAEDVIGYCSFRDEDDDCSYSYTVEGDGTPGPNSTVLVHRKKDCPPGTYWWLIPLLI
LLLPLLALLLLLCWKYCSCCKACLALLPCCSRGHMVGFKEDHYLLRENLMASDHLDTPML
RSGNLKGRDTVRWKITNNVQRPGLAAHTASTNPSEPVPYGLSLRLARLCTENLLKPDTRE
CAQLRQEVEENLNEVYRQIPGAHKLQQTKFRQQPNAGKKQDHTIVDTVLMAPRSAKPALL
KLTEKQVEQGAFHELKVARGYYTLIAEQDARGMVEFQEGVELVDVRVPLFMRPEDDDEKQ
LLVEAIDVAAGTATLGRRLVNITVIKEQASGVVAFEQSEYLVSRGEQVARVPVIRRTVDS
SKSQVSYRTPDGSAKRNRGKGLIRGQGDYVPVEGELLFHPGETWKELQVKLLELQEVDSL
LRGRQTRRFNIQLSNPKFGARLGQPQSATVIIGDRDELDRDFVSQTLSSPPPRGDLGAPQ
NPNAKATGSRKIHFNWLPPPGKPLGYRVKYWIQGDPESEAHLLDSEAPSVELTNLYPYCD
YDMKVCAYGAQGEGPYSSLVSCRTQQEVPSEPGRLAFNVISSTVTQLSWAEPAETNGEIT
AYEVCYGLVNEDNRPIGPMKKVLVDSPKRRMLLIENLRESQPYRYTVKARXGAGWGPERE
AIINLATQPTRPMSIPIIPDIPIVDAQGGEDYESFLMYSDDVLRSPAGSQRPSVSDDTGG
GGGWNVEPALGEQLDLRRVTWRLPPELIPRLSASSGRSSDAAEGGADGEGGPRPAGEHLV
NGRMDFAFPGSASSLHRVTTASSSYGTHLSPHLPRSVHSATSTLTRDYHSLTRTEHSHSA
TLPRDYSTLGSLSSHESRLTASVPDTPTRLVFSALGPTSLKVSWQEPQCEHALLGYSVEY
QLLTGGELRQLHITNPGQTSVVVEDLLPNHSYVFRVRAQSQEGWGREREGVITIESQVHP
QSPLCPLPGSAFTLSTPSAPGPLVFTALSPDSLQLSWERPRRPNGNILGYLVTCEMAHGG
GPATTFQVDGDNPESRLTVPGLSENVPYKFKVQAKTTEGFGPEREGIITIESQDGGPFPQ
LGSHAGLFQHPQQGEYSYVTTTHTSTSEPFLMDGLALRSQHLEASSSLTRHVTQEFVSRT
LTTSGSLSTQVDQQFLQT
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggccgcgtcccagcccgtgggccaggctgctgctggcagccctgctgagcgcc
tgcctccccggggacatggccaaccgctgcaagaaggcccaagtgaagagctgcacagag
tgcatccgtgtggacaaggactgcgcctactgcacggatgagatgttcacggagcggcgc
tgcaacaccccggccgagctgctggcggccggctgccggcagggcagtgtggtgatcatg
gagagcagcttccagatcacagaggagagccagatcgacacggagctgcggcgtagccag
gtgtccccccagggcatgtacatccggctgcggcccggcgaggagaggcactttgagctt
caagtcttcgagcccctggagagcccggtggacctgtacatcctcatggacttctccaac
tccatgtccgacgacctggacaacctcaagcagatggggtcgaacctggcccaggtcctg
agcaagctcaccagtgactacaccatcggctttggcaagttcgtggacaaagtcagcgtc
ccacagacggacatgaggcctgagaagttgaaggagccctggcccaacagtgaccctccg
ttctccttcaagaacgtcatcagcctgaccaaggacgcggatgagttccgggacaaactg
cagggagagcggatctcgggcaacctggacgctccggagggcggctttgacgccatcgtg
cagacggccgtgtgcacgagagccatcggctggcgcccggacagcacccacctgctggtg
ttttccaccgagtcggccttccactacgaggccgacggggccaacgtcctggctgggatc
atgaaccgcaacgacgagaagtgccacctggacgccacgggcacctacacccagtacggg
acccaggactacccgtccgtgcccaccctcgtgcgcctgctcgccaagcacaacatcatc
ccaatcttcgctgtcaccaactactcctacagctactacgagaagctgcacacgtatttc
cccgtgtcctcgctgggggtgctgcaggaggactcgtccaacatcgtggagctgctggag
gaagccttcaaccgcatccgctccaacctggacatccgagccctggacagcccccgaggc
ctgcggacagaggtcacctccaagatgttccagaagacaaagactgggtccttccacatc
cggcggggggaggtgggcacgtacctcgtgcagctgcgggcggcggaggacgtggatggg
aagcacgtgtgtcagctgcccgaagaggaccagaaaggaaacgtgcacctgaagccctcc
ttctccgacgggctccgcatggacgtgggcatcatctgtgacacgtgcgcctgtgagctg
gagaaggaggtgcggtcggcgcgctgtgacttccatggagacttcatgtgtggccactgt
gtgtgcgatgagggctggagcggcagcacctgcacctgcgccacgggctcactgagcgac
atcgagccctgcctgcgggacggcgaggacaagccgtgctcgggccgcggcgagtgtcag
tgcggccgctgcgtgtgctacggcgagggccgctacgagggccagttctgcgagtacgac
aacgtgcagtgcccccgcacctccggggtgctgtgcaatgaccgaggccgctgctccatg
ggccagtgtgtgtgcgagcccggttggacgggccccagctgtgactgtcccctcagcaac
gccacatgcattgacagccacgggggcatctgcaacgggcgtggctactgcgagtgtggc
cgctgccactgccaccagcagtcgctgtacaccgacaccatctgtgagatcaactactcg
ctgatcccgctgggcctctgtgaggacctgcgctcctgcgtgcagtgccaggcctggggc
acaggggcgaagaaggggcggacatgcgaggagtgcagcttcaaggtcaagatggtggac
gagcttaagagagcggaagacgtgatcgggtactgctccttccgtgacgaggacgacgac
tgtagctacagctacaccgtggagggcgacggcacccccgggcccaacagcaccgtcctg
gtgcacaggaagaaggactgcccgcccggcacctactggtggctcatccccctgctcatc
ctcctgctgccgctgctggccttgctgctgctgctctgttggaagtactgttcttgctgc
aaggcctgcctggcccttctcccctgctgcagccgaggccacatggtgggcttcaaggaa
gaccactacctgctgcgggagaacctcatggcctccgaccacctggacacgcccatgctg
cgcagcgggaacctcaaggggcgggacacggtccgctggaagatcaccaacaacgtgcag
cggcccgggcttgccgcccacacggccagcaccaaccccagcgagccggtgccttacgga
ctgtccctgcgtctcgcccgtctctgcaccgagaaccttctgaagccggacacgcgggag
tgcgcccagctgcgccaggaagtggaggagaatctgaacgaggtgtacagacagatccca
ggtgcacacaagctccagcagaccaagttccggcagcagcctaacgccgggaaaaagcaa
gaccacaccatcgtggacacggtgctcatggcgccgcgctcggccaagccggccctgctg
aagctgacggagaagcaggtggagcagggggccttccacgagctgaaggtggcccgcggc
tactacaccctcattgccgagcaggacgcccggggcatggtggagttccaggagggcgtg
gagctggtggacgtgcgggtgcccctgttcatgcggcccgaggacgacgacgagaagcag
ctgctggtggaggccatcgacgtcgcggcgggcacggccaccctgggccgccgcctggtg
aacatcaccgtcatcaaggagcaagccagcggggtggtggccttcgagcagtccgagtac
ctggtcagccggggggagcaggtggcccgtgtccctgtcatccggcgcaccgtggacagc
agcaagtcccaggtctcgtaccgcacgccggacggctcggcgaaaagaaaccggggaaag
ggactaatacgggggcagggggactatgtccccgtggaaggggagttgctgttccacccc
ggggagacctggaaggagctgcaggtgaaactcctggagctgcaggaggtggactccctc
ctgcggggccgccagacccgacgcttcaacatccaactcagcaaccccaagttcggggcc
cgcctgggccagccccagtcggccacggtcatcatcggggaccgagatgaactggaccgg
gacttcgtgagtcagaccctgtcatccccgccgcctcgcggggacctgggcgccccacag
aaccccaatgccaaggccaccgggtctcggaagatccatttcaactggctgccccctcct
ggcaaaccattgggctaccgggtcaagtactggatccagggtgaccccgagtctgaagct
cacctgctggacagcgaggcgccttcggtggagctcaccaacctctacccgtactgcgac
tacgacatgaaggtgtgcgcctacggggcgcagggcgagggcccctacagctccctggtg
tcctgccgcacccaacaggaagtgcccagtgagccggggcgcctggcgttcaacgtcatc
tcctccacggtgacccagctgagctgggctgagcccgcagagaccaacggcgagatcacg
gcctacgaggtctgctacggcctggtcaacgaggacaaccgacccatcgggcccatgaag
aaagtgctggtggacagccccaagagacgcatgctgctcatcgagaacctgcgcgagtcc
cagccctaccggtacaccgtgaaggcgcgcnacggcgccggctgggggcctgagcgcgag
gccatcatcaacctggccacccagcccacgcggcccatgtccatccccatcatcccggac
atccccatcgtggacgcccagggcggggaggactacgagagcttcctcatgtacagtgac
gacgtgctgcgctcgcccgccgggagccagaggcccagcgtctccgacgacactggcggc
ggcggcggctggaacgtggagcccgcgctcggggagcagctggacctgcggcgcgtcacg
tggcggctgcccccggagctcatcccgcgcctgtcggccagcagcgggcgctcctccgac
gccgccgaggggggcgcggacggggagggcggcccccggcccgccggagagcacctggtg
aacggccggatggactttgccttcccaggcagcgccagctccctgcacagggtgaccacc
gccagcagcagctacgggacccacctgagcccccacctgccccggagtgtgcacagcgcg
acctccaccctcacccgcgattaccactcgctcacccgcaccgagcactcccactcggcc
acactaccccgcgactactccaccctcggctccctctcttcccacgagtcccgcctgact
gccagtgtgcctgacacacccacccgcctggtgttctccgccctggggcccacatccctg
aaagtgagctggcaggagccacagtgcgagcacgcactgctgggctacagcgtggagtac
cagctgctgactggcggcgagctgcgtcagctccacatcaccaaccctggccagacctcc
gtggtggtggaggacctcctgcccaaccactcctacgtgttccgcgtgcgggcccagagc
caggagggctggggccgagagcgcgagggggtgatcaccatcgagtcgcaggtgcacccg
cagagcccactctgccccctgccaggttctgcattcactctgagcacgcccagtgcccca
ggcccgctggtgttcacggccctgagcccagactccctgcagctgagctgggagcggcca
cggaggcccaacggaaatatcctcggctacctggtgacctgtgagatggcccacggagga
gggccagccaccacgttccaggtggatggggacaaccccgagagccggctgacggtgccg
ggtctcagcgagaacgtgccttacaagttcaaggtgcaggccaagaccaccgagggcttc
gggccggagcgtgagggcatcatcaccatcgagtcccaagatggaggccccttcccacag
ctgggcagccacgccgggctcttccaacacccgcagcaaggcgaatacagttatgtcacc
accacccacaccagcaccagcgagcctttcctgatggatggcctggccctgcggtcccag
catctggaagcaagcagctccctcacccggcacgtgacccaggagtttgtgagccggaca
ctgaccacaagcgggagcctcagcacccaggtggaccagcagttcctccaaacctga
DBGET
integrated database retrieval system
