Oryctolagus cuniculus (rabbit): 100342436
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Entry
100342436 CDS
T03373
Gene name
PYM1, WIBG
Definition
(RefSeq) PYM homolog 1, exon junction complex associated factor
KO
K14294
partner of Y14 and mago
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
RNA transport
ocu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 RNA transport
100342436 (PYM1)
03015 mRNA surveillance pathway
100342436 (PYM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100342436 (PYM1)
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100342436 (PYM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago-bind
Nif11
VirC2
Motif
Other DBs
NCBI-GeneID:
100342436
NCBI-ProteinID:
XP_008254838
UniProt:
A0A5F9C3X1
LinkDB
All DBs
Position
4
AA seq
204 aa
AA seq
DB search
MEAAGKPEAAGTGKYIASTQRPDGTWRKQRRVKEGYVPQEEVPVYENKYVKFFKSKPELP
PGLSPEATAPAAPSRPEGGEPGLSKTAKRNLKRKEKRRQQQEKGDAEALSRTLEKVSVGD
TARPPSAPQGSQAAPTAASEQPDPAATTEKAKKIKNLKKKLRQVEELQQRIQAGEVSQPS
REQLEKLARRRALEEELEDLELGL
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggaagctgccggcaagcccgaggctgcggggacaggcaagtacatcgcctcaacacag
cgacccgacgggacctggcgcaagcagcggagggtcaaagaaggctacgtgccccaggag
gaggtcccagtctatgaaaacaagtatgtcaagtttttcaagagtaaaccagaactgccc
ccagggctgagccctgaggccactgctcctgccgccccgtccaggcctgaaggtggtgag
ccaggcctctctaagacagccaaacgcaacctgaagcggaaggagaagaggcggcagcaa
caagaaaaaggagatgcagaggccttgagccggactcttgagaaggtgtccgtgggagac
acagcccgaccccccagtgctccacagggctcccaggcagcccccacagctgcctctgag
cagcccgacccagctgccaccaccgagaaagccaagaagataaagaacctaaagaagaag
ctccgtcaggtggaggagctgcagcagcgaatccaggctggggaggtcagccagcccagc
agagagcagctggagaagctggcgaggaggagggcgctggaggaggagctggaggacttg
gagcttggcctgtga
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