Oryctolagus cuniculus (rabbit): 100342974
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Entry
100342974 CDS
T03373
Gene name
SRRM1
Definition
(RefSeq) serine and arginine repetitive matrix 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
RNA transport
ocu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 RNA transport
100342974 (SRRM1)
03015 mRNA surveillance pathway
100342974 (SRRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100342974 (SRRM1)
03041 Spliceosome [BR:
ocu03041
]
100342974 (SRRM1)
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100342974 (SRRM1)
Spliceosome [BR:
ocu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
100342974 (SRRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
ETRAMP
Motif
Other DBs
NCBI-GeneID:
100342974
NCBI-ProteinID:
XP_002716019
Ensembl:
ENSOCUG00000008438
UniProt:
A0A5F9DTZ2
LinkDB
All DBs
Position
13
AA seq
905 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKERTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPVPEPKEPSPEKNSKKEKEKTRARSRSRSKSRSRTRSRSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSS
SSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNR
TRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQR
RQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSP
RGRRRRSPSPPPTRRRRSPSPAPPPRRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQR
RYTPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKPRSSPVTKRRSPSLSSKHRK
GSSPSRSAREARSPQPNKRHSPSPRPRVPQTSSSPPPARRAPSSSPQRRQSPSPSTRPIR
RVSRTPEPKKTKKTASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSP
AVPVKKAKSPTPSPSPARNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAAAV
AAAAAVPPAAVTAATTTSAQEEAEAALEPKKETESEAEDNLDDLEKHLREKALRSMRKAQ
VSPQS
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgcggaacaagtgcggaacaggataatcggttcagcaacaaa
cagaagaaactactgaagcagctgaagtttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaagttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactctaaaatgatgcaaatcaacctgactgggtttttgaatggaaaaaatgctagagaa
tttatgggagaactgtggcctctgctgttaagtgcacaagaaaacatcgctggaatcccc
tctgctttcctggaactgaagaaagaagaaataaaacagagacagattgagcaagaaaaa
ttggcatctatgaaaaagcaagatgaagacaaagataagagggataaggaagaaaaagaa
agcagcagagaaaaaagggaacggtctcgaagcccgagaagacgcaaatccagatctcct
tcccctagaagacggtcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgccacagaaccaagagccggagtccttcccccgcgccagaaaagaaggaaagaact
cctgagctcccagaaccttcagtgaaggtcaaagaaccctcagtgcaggaggcgacttcg
actagtgacatcctgaaagttcccaagcctgaacctgtaccagaacctaaagaaccttct
ccagaaaaaaattccaaaaaggaaaaggagaagaccagagcacgatctcggtcacgttcc
aaatcaaggtcacggacgcggtctcgctctccttctcacactcgacctagacggcgccat
agatcccgatcaagatcatactctcctagaagacggccaagcccgaggaggcgcccatcc
cctcggagaagaactcctccaagacgaatgcctcctccgccacggcacaggaggagcaga
tctccagtgcgaagaagacgacgttcatcagcatccttgtctggaagtagctcatcatcc
tcttcatctcgttcccggtcgccgccaaagaaacctcctaagaggacatccagtccccct
cgaaaaactcgcaggctatctccttccgcgagtcctccaaggcgaaggcacaggccatcc
cctccagcaactccaccaccaaaaactcgccattccccaacaccccagcagtcaaaccgt
actagaaaaagccgtgtttctgtgtctccagggagaacttcaggtaaagtgacaaagcat
aaaggtactgagaaaagagaatccccttcaccagcaccgaaacctagaaaagtagaatta
tctgaatcagaagaagacaaaggtggcaaaatggctgcagcagattctgtgcagcagaga
cgccagtacagacgacagaaccagcagtcttcatctgactctggctcctcttcgtcctca
gaagatgagcgacccaaaagatcccacgtgaagaatggtgaggtaggcaggcggcggaga
cattccccttccaggagtgcctctccctcaccacgaaagcgccagaaagagacttcccct
cgtggtagacggaggagaagtccctcaccaccacccaccagaaggcggcgctctccttct
cccgctcctcctccgcgacggcgcaggtctcctacaccaccgccccgacgaaggactcct
tctccaccgccacgccggcgctcgccttcccctcggaggtactcccctcccatacagagg
agatacaccccttctccacctcccaagagaaggacggcttctcctcctccccctccaaaa
cggagggcgtcgccatctccaccaccaaagcggcgagtctcgcattctccacctcccaaa
ccgagaagctcgccggtcaccaagagacgctcgccttcgttgtcatccaagcataggaaa
ggctcttcgccaagccgctccgcccgggaagcccgctcgccacagccaaacaagcggcac
tcgccttcccctcggcctcgagttcctcagacctcctccagccctccacccgcgcggaga
gcaccgtcgtcctcaccccaaagaaggcagtctccatctccaagtactaggcccattagg
agagtctcccggactccggagcctaaaaagacaaaaaagactgcctctccaagcccacag
tctgtaaggagggtctcatcctcccgatctgtgtctggatctcctgagccagcagctaaa
aaacctccagcacctccgtcccctgtccagtctcagtcgccctctacaaactggtcacca
gcggtaccggtcaaaaaggctaagagcccaacaccaagcccgtcaccggcaaggaattca
gatcaagaaggaggtggaaagaaaaagaagaaaaagaaggacaagaaacacaaaaaggat
aagaagcacaagaagcacaaaaaacacaagaaggagaaggcggtggcagcggcggccgtc
gcggctgctgctgccgtcccccctgcagctgtcactgctgccacgaccacctcagcacag
gaggaggcagaggcagcgctggagcccaagaaggagactgaaagtgaagctgaagataac
cttgatgacctagagaagcacctgcgggagaaggccctgcggtccatgcggaaggctcag
gtgtccccacagtcctag
DBGET
integrated database retrieval system
