Oryctolagus cuniculus (rabbit): 100343259
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Entry
100343259 CDS
T03373
Name
(RefSeq) E3 ubiquitin-protein ligase LNX
KO
K10692
ligand of Numb protein X 1/2 [EC:
2.3.2.27
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocu04121
]
100343259
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100343259
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100343259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
DUF6288
zf-RING_5
TRAF3_RING
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
100343259
NCBI-ProteinID:
XP_051691005
LinkDB
All DBs
Position
Unknown
AA seq
724 aa
AA seq
DB search
MSQPDPGEEPEPSPEPLCEVCGQAHSPEENHCYTYAEDVDDDLICHICLQALVDPLDTPC
GHTYCALCLTSFLVEKDFCPVDRLPLLLQHCRRSTLLVRKLLNKLPVTCPFAGHCAQVLP
RCDLQQHLQTSCKGVSHYGLTKERKRRSQHGCPDGCASLTATTLSPEAATAASSPCAADE
PGLDNPAYVSTVEDGPAANSVADTGHSNPVRARPFERCTIRSRSFKKINRALSALRRTKS
GGGAVASPAGQGGDSSEDIAGPEAYPRLYHLIPDGEVTSVKITRAHPRESLSMRLVGGSE
TPLVHMVIQHIYRDGAIARDGRLLPGDIVLKVNGMDISSVPHNYALRLLRQPCQVLRLTV
LREDKVRGRSSAQAPDARGPRDSFHVTLHKSSPEEQLGIKLVHKADEPGVFIFSVLDGGL
ADRHGQLQEDDRIVAVNGHDLRYGSPESAAHLIQASEKRVHLVVSRHVRQQSPDVCQEAG
WNGGDGSHAHQPLHPAATCHEKVVSVQKDPSESLGMTVAGGASHGEWDLPIYIISVEPGG
VISRDGRIKTGDILLNVNGTDLTEVSRSEAVALLKSTSSSVVLRVLEVREPEPQEEDSSP
GALDASHDATPSGDWAPSWVMWLGLPRYLYHCKDVALRRNAAGSLGFCIVGGYEEHSGNK
PFFIKSVVEGTPAYNDGRIRCGDILLAVNGRSTAGMTHACLARMLKELKGRITLTLVSWP
GTFL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgagccagccagaccccggcgaggagccggagcccagcccggagcccctgtgcgaggtg
tgcggccaagcccactcccccgaggagaaccactgctacacgtacgcggaggacgtggat
gacgacctcatctgccacatctgcctgcaagcgctggtggacccgctggacacgccgtgc
ggccacacctactgcgcgctctgcctcaccagcttcctggtggagaaggacttctgcccc
gtggaccgcctgccgctgctgctgcagcactgcaggaggtccaccctcttggtgcgcaag
cttctcaacaagctgccggtgacctgccccttcgccgggcactgcgcccaggtgctgcca
cgctgcgacctgcagcagcacctccagaccagctgcaagggtgtctcccactacggcctg
accaaggaaaggaagcggcgctcccagcatggctgtcccgacggctgcgcgagcctcaca
gccacgacgctgtccccagaggccgccacagccgcctccagcccctgtgccgcggatgag
cccggcctggacaaccctgcctacgtgtccacggtggaggacgggccagcagccaacagc
gtggccgacaccggccacagcaacccagtcagggcacggccctttgagcggtgcaccatc
aggagccggtcctttaagaaaatcaaccgcgcgctgagtgctctccgaaggaccaagagt
ggtgggggcgcggtggccagccccgctggccagggcggggacagttctgaagacatcgca
ggcccggaagcctatccgaggctgtatcacctgattccggacggggaggtcaccagcgtc
aagatcacccgcgcgcatccccgggaaagcctctccatgaggctcgtggggggcagcgag
acgccgctggtccacatggtcatccagcacatctaccgcgacggcgccatcgccagggac
ggccggctcctgccgggggacatcgtgctgaaggtcaacggcatggacatcagcagcgtg
ccccacaactacgccctgcgcctgctgcgccagccctgccaggtgctgcggctgaccgtg
ctgcgcgaggacaaggtccggggcaggagcagcgcgcaggccccggacgcccgcgggccg
cgggacagcttccacgtgaccctgcacaagagcagccccgaggagcagctggggatcaag
ctggtgcacaaggcggacgagcccggggtgttcatcttcagcgtgctggacggcggcctg
gccgaccgccacgggcagctgcaggaggacgaccgcatcgtagccgtcaacggccacgac
ctccgatacggcagcccggaaagcgcagctcatctcatccaggccagtgaaaagcgcgtc
cacctcgtggtgtcccgccacgtgcgacagcagagccccgatgtctgtcaggaggccggc
tggaatggcggcgacgggagccacgctcaccagcccctccatcccgcagccacctgtcat
gagaaggtggtaagtgtccagaaagaccccagtgagtccctcggcatgacggttgcaggt
ggcgcgtcacacggcgagtgggacttgcccatctacatcatcagtgttgagcctggagga
gtcataagccgagacggaagaataaaaacaggtgacattctgctgaacgtgaatggcaca
gacctcaccgaggtgagccgcagcgaggccgtggccctgctgaaaagcacgtcgtcctcg
gtggtgctgagggtcttggaagtcagggagcccgagccccaggaagaggacagcagcccc
ggggccctggacgccagccacgacgcgaccccctctggtgactgggccccgtcctgggtc
atgtggctggggctgccacggtacttgtatcactgcaaagatgtcgcactacgcagaaac
gcggcaggcagcctgggcttctgcatcgtgggagggtatgaagaacacagcggaaacaag
cctttctttatcaaatccgtggtggaaggcacaccagcgtacaacgatggaaggatcagg
tgcggtgacattctcctcgcagtcaacggcaggagcacagcaggaatgacgcacgcctgc
ttggctcgaatgctgaaggaactcaaaggaagaatcaccctcactctggtgtcctggcct
ggcacattcttgtag
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