KEGG   Oryctolagus cuniculus (rabbit): 100343626
Entry
100343626         CDS       T03373                                 

Gene name
NUP98
Definition
(RefSeq) nucleoporin 98
  KO
K14297  nuclear pore complex protein Nup98-Nup96
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu03013  RNA transport
ocu05014  Amyotrophic lateral sclerosis
ocu05164  Influenza A
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 RNA transport
    100343626 (NUP98)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100343626 (NUP98)
  09172 Infectious disease: viral
   05164 Influenza A
    100343626 (NUP98)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ocu03019]
    100343626 (NUP98)
   03036 Chromosome and associated proteins [BR:ocu03036]
    100343626 (NUP98)
Messenger RNA biogenesis [BR:ocu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     100343626 (NUP98)
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Spindle formation proteins
    100343626 (NUP98)
SSDB
Motif
Pfam: Nup96 Nucleoporin2 Nucleoporin_FG ANAPC3
Other DBs
NCBI-GeneID: 100343626
NCBI-ProteinID: XP_002708582
Ensembl: ENSOCUG00000017583
LinkDB
Position
1
AA seq 1799 aa
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTSGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTSLFSSQNNAFAQNKPTGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYESKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSPATSSATGL
FSSSTTNSGFSYGQNKTAFGTSTTGFGTNPGGLFGQPNQQTTSLFSKPFGQATTTQNTGF
SFGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSAGTAFGTGTSLFGQTNTGFGAV
GSTLFGNNKLTTFGTSTTSAPSFGTNSGGLFGFGTNTSGNSIFGSKPAPGTLGAGLGTGF
GTALGAGQASLFGNNQPKIGGPLGTGGFGAPGFNTTTATLGFGAPQAPVALTDPNASAAQ
QAVLQQHLNSLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPA
TRVRPKALQTTGTAKSQLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLNNSNLFSPVNRD
SEDLASPSEYPENGERFSFLSKPVDENHQDGDDDSLVSRFYTNPIAKPIPQTPESTGNKH
NNSNSVDDTIVALNMRVALRNGLEGSSEETSFHDESLQDDREETENNAYHMHPAGIVLTK
VGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKE
VIVYLDDNQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRLEAVSRK
QGAQFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTSTKKLKTAPLPPAGQTTPF
QTALNGKPAPPPQSQSPEVEQLGRVVELDSDMIDITQEPVLDSMLEESVPEDQEPVSAST
HIASSLGINPHVLQIMKASLLADEEDIDMMLDQRFSHVPSKADASQEICSPRLPISASHP
SKSRSLGGGLLQSKFTSGTFLSPSASVQEFHTPRASSLMNIPSTSPWSVPPPLTAVFTVP
SPAPEFQLKTVGTRRQPGLVPLEKSVTYGKGKLLMDMALFMGRSFRIGWGPNWTLANSGE
QLSGSQELENHQVSESVEYGFLPNPVAVKSLTESPFKVHLEKLSLRQKKLDEDVQLYQTP
LELKLKHSTIHVDELCPLIVPNPGVAIIHDYAVWVKEASGDLLEVPIVKHWSLTWTLCEA
LWGHLKELDSQLDEPNEYIQILERRRAFSRWLSHTAAPQIEEEVSLTQKDNPVEAVFSYL
TGNRIGEACSLAQQTGDHRLALLLSQLVGSQSVRELLTMQLVDWHQLQADCFIQDERLRI
FALLAGKPVWQLSEQKQINVCSQLDWKRSLAVHLWYLLPPTASISRALSMYEEAFQNTSE
GDRYACSPLPSYLEGSGCVVEEEQDSRRPLRDICFHILKLYSDRHYDLNQLLEPRSITAD
PLDYRLSWHLWEVLRALNYTHLSEQCEGVLQVSYAGQLESEGLWEWAIFVLLHIDNSSMR
EKAVRELLTRHCQLIETPESWAKETFLTQKLCVPAEWIHEAKAVRAHMESDKHLEALYLF
KAGHWNRCHKLVVRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWETSGLVYLDYIQ
VIEMLHRIQQVDFSSYELEQLHTKVTSLCNRIEQIQCYNAKDRLAQSDMAKCVANLLRVV
LSLQHTPDATSDSTPDPQRVPLRLLAPHIGRLPMPEDYALEELRSLTQSYLRELTVGSQ
NT seq 5400 nt   +upstreamnt  +downstreamnt
atgtttaataaatcatttggaacaccctttgggggtggcacaggtggatttggcacaact
tcaacatttgggcaaaatactggctttggtactactagtggaggagcatttggaacatct
gcatttggttctagcaacaatactggaggcctatttggaaactcacagaccaaaccagga
ggattatttggtaccaattcatttagccagccagctacctccacaagcaccggctttggg
tttggtacatcaacaggaacgtcaaatagcttgtttggaactgcaagcacagggaccagt
cttttctcatcccaaaacaatgcctttgcacaaaacaaaccaactggctttggcaatttt
ggaacaagtactagcagtgggggactgttcggaactacaaataccacctctaaccccttt
ggtagcacatctggctcactctttggcccaagtagttttacagctgctcctactggaact
actattaaatttaatcctccaactggcacagatactatggtcaaagctggagtaagcact
aacataagtaccaagcaccagtgtattactgctatgaaagaatatgaaagcaagtctcta
gaggaacttcgtttagaggattatcaggctaatcggaaaggcccacagaaccaagtagga
gcaggtaccacgactggcttgtttgggtcttctccagccacatccagtgccacgggactc
ttcagctcctccactactaattcaggcttttcatacggtcagaacaaaactgcctttgga
actagtacaactggatttgggacaaatccaggtggtctctttggccagcctaatcagcag
actaccagtctcttcagcaaaccgtttggtcaggccacaaccacccagaacactggtttt
tcctttggtaataccagcaccttaggacagccaagcaccaacaccatgggtttgtttgga
gtaactcaagcctcacagcctggaggtctttttgggacagctacgaataccagcgctgga
acagcatttggaacaggaacaagtctttttgggcagaccaatactgggtttggtgctgtt
ggttcgaccctgtttggcaataacaagcttaccacatttggaaccagcacaaccagtgct
ccttcatttggtacaaacagtggcgggctctttggttttggcacaaataccagcgggaat
agtatttttggaagtaaaccagcacctgggactctgggagctgggcttggtacaggattt
ggaacagctcttggtgctggacaggcatctttgtttggaaacaaccaacctaagatcgga
gggcctcttggtacaggaggctttggggcccctggatttaataccacgacagccactttg
ggctttggagccccccaggccccagtagctttgacagatccaaatgcttccgctgctcag
caggctgtactccagcagcacctcaatagtctaacatactctccatttggagactcccct
ctcttccggaatcctatgtcagaccctaagaagaaagaagagagattgaaaccaaccaat
ccagcagcccagaaggctcttactacacctactcattataaactgacaccccgtcctgcc
accagagtccggccaaaggctttacaaacaacaggaacggccaagtcacagctctttgat
gggctggatgatgatgaaccatctctagccaatggcgcattcatgcccaagaagagcatt
aagaagttggttttgaagaaccttaacaatagcaatctcttttctcctgttaatcgtgat
tcagaagatctggcttcaccatctgaatatccagaaaatggagagagatttagtttcctt
agcaaacctgtggatgagaaccatcaggatggtgatgatgattcacttgtatcacgtttt
tataccaacccgattgcaaaacctattcctcaaaccccagagagtactggaaataaacac
aacaacagtaacagtgtggatgatacaattgttgctttaaacatgcgtgttgctttgcga
aatggactagaaggaagcagtgaagaaacttctttccatgatgagtcattacaggatgat
cgtgaagaaacagaaaataatgcttaccatatgcacccagcaggcattgttctcactaaa
gttggttactatactattccatctatggatgaccttgctaaaattaccaatgaaaaagga
gagtgcatcgtctctgatttcactattggtcgtaaaggttatggttcaatctattttgaa
ggagatgtgaatttaacaaatctaaatttggatgatattgtgcatatccgaaggaaagaa
gttattgtctacctagatgataaccagaagccacctgtgggtgaagggctaaacagaaag
gctgaagtgacattggatggagtttggccgacagacaaaacatctcgttgtttaataaag
agtccagatcgacttgctgatatcaactatgagggaagattagaagcagtttcaaggaaa
caaggagctcagttcaaagagtatcggcctgaaactggttcttgggtgtttaaggtctcc
catttttctaagtatggtcttcaagattctgatgaagaagaagaggaacgtccatccaag
actagtaccaagaagttgaagactgcccctttgccccctgcagggcagactacccctttc
cagacggctcttaatggcaaacctgcacctccaccccagagtcagagtccagaggtggaa
cagttagggagggttgtggaactggacagtgacatgatagatatcacccaggagccagtt
ttggattccatgttagaagagagcgtgcctgaagatcaggaacctgtgtctgcttccacg
cacattgcatcttcactgggaattaatccacatgttttacagatcatgaaagcatcactg
cttgctgatgaagaagatatagacatgatgctggatcagcgcttcagtcatgttccttcc
aaagcagatgcttctcaagaaatctgttctcccagactccccatttcagcatcccaccca
tcaaaatctcgttcactaggtggtggattactgcaatcaaaatttacaagtggaactttt
ctttcaccaagtgcctctgtgcaagaatttcacactcccagagcatcatctttaatgaat
atcccgtccacatccccttggtctgtccctccacccctgactgctgtgtttacagtgccc
agcccagcccctgaatttcaattgaaaacagtgggcacacgcagacaacctggcctagtc
cctcttgagaagtcggtcacttatggcaaggggaaactcttgatggacatggctctattt
atgggacgctcatttagaattggatggggtcccaactggactcttgctaatagtggagaa
cagctgagtggctctcaagaactggaaaatcatcaagtttctgaatctgtggaatatgga
tttctacccaatccagtagctgttaaatctctaactgagtctccattcaaagttcatttg
gaaaaactcagtttgagacaaaagaagctggatgaagacgtgcaattataccagacacct
ctggagctcaaattaaaacatagcacaatccatgtggatgagctgtgtcctctcattgtc
cccaatccaggagttgctatcattcatgactatgcagtttgggttaaggaagcatcagga
gacttattggaagtaccaattgtaaagcactggagcctaacgtggacactatgtgaagcc
ctttggggtcatctgaaggagctcgacagccagctggatgagcccaatgaatacattcaa
attctggagcgacgaagagctttctcccgctggctgtcccatacagctgcacctcaaatt
gaagaagaagtctccttaacgcaaaaagacaaccctgtggaagctgtgtttagctacctc
acaggcaataggatcggtgaggcctgttctctggcccagcagacaggtgatcatcgcctt
gcccttctgttatctcagttggtggggagccagtccgtccgggagctgctcactatgcag
ctggtggattggcatcaactccaggctgactgcttcatccaggatgagagactgcgcata
tttgccctgttagctggaaaaccggtatggcagctctcagaacagaagcaaatcaacgtg
tgttcccagctagattggaaacgctccctggctgtccatctgtggtatttgcttccacca
acagcttccatttccagggcactcagcatgtatgaagaagcatttcagaatacctctgag
ggtgacagatatgcctgttccccacttccttcatacctggagggctctggctgtgtggta
gaggaggaacaagactcacggagaccacttcgggacatctgctttcacattctaaagctg
tacagtgacagacattatgatctcaaccagctgttggaacctcgaagcataacagcagat
cctttggactaccgcctaagctggcatttgtgggaggttctacgggctcttaactacacc
catctctcagagcagtgtgagggtgtgctgcaggtcagttatgcaggccaactggaaagc
gagggactctgggagtgggccatctttgtcctcctccacattgacaactcaagcatgcgt
gagaaggctgtccgagagctgcttacccggcactgccagctaatagagacccctgagtct
tgggctaaggagactttccttacccagaagctttgtgtacctgctgagtggattcacgag
gccaaagcagtgagagcacacatggaatctgacaagcacttggaggccctttatttattt
aaagctggccactggaaccgctgccacaaacttgtcgtccgacacttagcttctgatgcc
atcattaatgagaactatgactacctgaaaggattcttggaagatctggcacctccagaa
cgcagcagcctaattcaggactgggaaacttctgggcttgtttacctggactatattcag
gttattgaaatgctccaccgtatacaacaggtggatttctcgagttatgagctggagcag
ttacacaccaaagtcacttcactgtgcaatcggatagagcagattcagtgttacaatgcc
aaggatcgcctggctcagtcagacatggccaagtgtgtcgccaatttgctgcgggtggta
ctgagcctgcagcacacccctgatgccacctctgattcaacgccagaccctcagcgagtt
cctttgcgcctgttggctccccacattggccgcctccccatgcctgaagactatgccttg
gaggaactgcgcagcctcacacagtcctatctgcgagaactgactgttgggagccagtga

DBGET integrated database retrieval system