Oryctolagus cuniculus (rabbit): 100345455
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Entry
100345455 CDS
T03373
Name
(RefSeq) probable global transcription activator SNF2L1 isoform X1
KO
K11727
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1 [EC:5.6.2.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100345455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ocu03036
]
100345455
Chromosome and associated proteins [BR:
ocu03036
]
Eukaryotic type
Chromatin remodeling factors
NuRF complex
100345455
CERF complex
100345455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
TPR_15
UBA_2
Motif
Other DBs
NCBI-GeneID:
100345455
NCBI-ProteinID:
XP_002720326
Ensembl:
ENSOCUG00000001047
UniProt:
G1SEM2
LinkDB
All DBs
Position
X:complement(103806833..103904392)
Genome browser
AA seq
1069 aa
AA seq
DB search
MEPDTAAVAATVAAVDANATVVIVEDEQPGPSTFEEGAAAAATEATASTEKGEKKKEKNI
SPFQVKLGMKASKSEKEMDPEYEEKMKTDRAKRFEFLLKQTELFAHFIQPSAQKSPTSPL
NMKLGRPRMKKDEKQSLISAGDNRHRRTEQEEDEELLSESRKTSHVCVRFEVSPSYVKGG
PLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPK
STLHNWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWDVCVTSYEMVIKEKSVFK
KFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHELWALLNFLLPDV
FNSADDFDSWFDTKNCLGDQKLVERLHSVLKPFLLRRIKTDVEKSLPPKKEIKIYLGLSK
MQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDEHI
VNNSGKMLVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEER
EDKFLEVELLGQREAIEAFNVPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVD
LQAMDRAHRIGQKKPVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLA
KDEMLQMIRHGATHVFASKESELTDEDITTILERGERKTAEMNERLKKMGESSLRNFRMD
VEQSLYKFEGEDYREKQKLGMMEWIEPPKRERKANYAVDAYFREALRVSEPKIPKAPRPP
KQPNVQDFQFFPPRLFELLEKEILHYRKTIGYKVPRNPDNPNPAVAQREEQRKIDGAEPL
TQEETEEKEKLLTQGFTNWTKRDFNQFIKANEKYGRDDIDNIAREVEGKSPEEVMEYSAV
FWERCNELQDIEKIMAQIERGEARIQRRISIKKALDAKIARYKAPFHQLRIQYGTSKGKN
YTEEEDRFLICMLHKMGFDRENVYEELRQCVRNAPQFRFDWFIKSRTAMEFQRRCNTLIS
LIEKENMEIEERERAEKKKRATKTPMSQKRKAESASESSGKKDVKKVKS
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggagccggacaccgccgcagtggcagccaccgtggcagcggttgatgcgaacgccaca
gtcgtgattgtggaggacgagcagccggggccgtccacctttgaggagggagcggccgcc
gcggccaccgaagccaccgccagcacagagaagggcgagaagaagaaggagaaaaacatt
tctccctttcaagtcaagcttggcatgaaagcttctaaatctgaaaaagagatggaccca
gagtatgaagagaaaatgaaaacagacagagcaaagagatttgaatttttactgaagcag
acagaactttttgcacatttcattcaaccttcagcacagaaatctccaacatctcctttg
aacatgaaattgggacgacctcgaatgaagaaagatgaaaaacagagcttaatttctgct
ggagataaccgtcacaggcgcacagaacaagaagaggatgaggagctcctgtcagagagt
cggaaaacatctcatgtgtgtgtgagatttgaggtgtccccttcctatgtgaaaggagga
ccactgagagattatcagattcgaggactgaactggttgatttccttgtatgaaaatgga
gtcaatggtattttggcagatgaaatgggccttggtaagactttacaaaccattgctttg
cttggttacctgaaacactaccgaaacattcctggacctcacatggttttagttccaaag
tctactttacacaactggatgaatgaatttaaacgatgggtcccatcgctccgtgttatt
tgtttcgttggagacaaggatgcaagagctgcttttattcgtgatgaaatgatgccagga
gagtgggatgtatgtgttacttcttatgaaatggtaattaaagagaaatctgtattcaaa
aagtttcattggcgatacctagtcattgatgaagctcatagaataaaaaatgaaaaatct
aagctttcagagattgttcgtgagtttaagtcaaccaaccgtttgctactaactggaaca
cctttgcagaataatctgcatgaactgtgggctttactcaactttttattgcctgatgtc
tttaattctgcagatgactttgattcctggtttgatactaaaaattgtcttggcgatcaa
aaacttgtggaaagacttcattcagttttgaaaccatttttgttacgtcgtataaaaact
gatgtagagaagagtttgcctccaaaaaaggaaataaaaatttacttgggactgagtaag
atgcaacgagaatggtacacaaaaatcctgatgaaagatattgatgttttaaattcttct
ggcaagatggacaagatgcgactcttaaatattctaatgcaacttcgaaagtgttgcaat
catccatacctgtttgatggtgctgagcctggtccaccttataccactgatgaacatatt
gtcaacaacagtgggaagatgctagttctagataaactgttggccaaactcaaagaacag
ggttcaagggttctcattttcagccagatgacccgcttgctggatattttggaggattat
tgtatgtggcgtggttatgagtattgtcggttagatggacaaaccccacatgaagaaaga
gaggataaattcctagaagtggaattactgggtcaaagggaagcaatagaggcctttaat
gttcctaatagtagcaaattcatctttatgctgagtaccagggctggaggtctcggaatt
aacttggcaagtgctgatgtggttatactgtatgattcagactggaatccacaggttgat
ctacaagctatggatcgagctcatcgtattggtcagaagaaaccagtacgtgtattccgt
ctcatcaccgacaacactgtggaagaaaggattgtggaaagagcagagataaaactgaga
cttgattcaattgttatacaacaaggaagactcattgaccagcaatctaacaagctggca
aaagacgaaatgttacagatgatccgccatggagccacccatgtttttgcttcaaaggaa
agcgagctgacagatgaagatattacaactattctggaaagaggagaaaggaagactgca
gagatgaatgaacgcttgaagaaaatgggagagtcttctctaaggaattttagaatggac
gttgaacaaagtttgtacaagtttgaaggagaagattatagagaaaaacaaaagcttggt
atgatggaatggattgaacctcctaaacgagaacgcaaagcaaactacgccgtggatgcc
tactttagagaggctttgcgtgtcagcgagccaaagatcccaaaggctccacggcctccg
aagcagccaaatgttcaggattttcaatttttcccaccacgtttatttgagcttttggaa
aaagaaattcttcattatcgaaagacaataggctataaggtccctaggaatcctgataac
ccaaatccagctgtggctcaaagagaagaacaaagaaagatcgatggagcggaacctctt
acacaggaagagactgaagaaaaggaaaaacttctcacacaaggtttcacaaactggacg
aagcgagattttaatcagtttattaaagctaatgagaagtatggaagagatgacattgat
aatatagctcgagaggtagagggcaagtctcctgaggaggtcatggaatattcagctgtg
ttttgggaacgttgcaatgaattacaggatattgagaaaattatggctcagattgaacgc
ggagaagcaagaatccaacgaaggatcagtatcaagaaagccttggatgctaaaattgca
agatacaaggctccatttcatcagttgcgtattcagtatggaaccagtaaaggaaagaac
tatactgaagaagaagatagattcttgatttgtatgttacacaagatgggctttgataga
gaaaatgtgtatgaagaattaagacagtgtgtacggaatgctccccagtttagatttgac
tggtttatcaagtctagaactgccatggaattccagagacgctgtaacactctgatttca
ttgattgagaaagaaaatatggaaattgaggaaagagagagagcagaaaagaagaaacgg
gcaactaaaactccaatgtcacagaaaagaaaagcagagtcagcttctgagagctctgga
aagaaggatgtcaagaaggtgaaatcctaa
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