Oryctolagus cuniculus (rabbit): 100347070
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Entry
100347070 CDS
T03373
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X4
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100347070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100347070
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100347070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_14
TPR_19
TPR_8
TPR_MalT
TPR_7
BLOC1_2
COMPASS-Shg1
DUF948
Motif
Other DBs
NCBI-GeneID:
100347070
NCBI-ProteinID:
XP_008264326
Ensembl:
ENSOCUG00000011431
UniProt:
A0A5F9CVF6
LinkDB
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Position
14:20925161..21007929
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AA seq
744 aa
AA seq
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MAADKPADQGAEKHEGAGPSSGITDQEKEFSTNALQAFTSGNYDACLQHLACLQDINKDD
YKIILNTAVAEFFKSNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSVLYYNQAVVL
YHLRQHTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYILTYQAEKALHLLAVLEKMIS
QGNNNKNGKNETGNNTSKDGSNHKAESGAVIEAAKSKIHQYKVRAYIQMKSLKACKREIK
SVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSSNIAEHPGFMKTGECLRCMFWNNLG
CIHFAMSKHNLGIFYFKKALQENDNVCAQLSAGSADPGRKFSGRPMCTLLTNKRYELLYN
CGIQLLHIGRPLAAFECLIEAVQVYHANPRLWLRLAECCIAANKGTSEQETKGLPSKKGI
VQSIVGQGYHRKIVLASQSIQNTVYNDGQSSAIPVASMEFAAICLRNALLLLPEEQQDPK
QENGSKNSSQLGGTTESSDSSETCSSKSHDGDKFIPAPPSSPLRKQELENLKCSILACSA
YVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVT
DVSLGISSNEQDQGSDKGENEPMESSGKRAPQCYPSSVNSARTVMLFNLGSAYCLRSEYD
KARKCLHQAASMIHPKEVPPEAILLAVYLELQNGNTQLALQIIKRNQLLPTVKAHSELRK
KAVFPPTHPIQPIQMPAFTTVQRK
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacaagcccgcagatcagggcgcggagaagcacgaaggggcaggtccgtcg
tccggcatcacggatcaagagaaggagttctccacgaacgctctccaggctttcacatct
ggaaattacgatgcctgtctacaacacctcgcctgtctacaagatataaacaaagatgat
tataaaataattttgaatacagcagtagctgaattttttaaaagtaaccaaacaacaaca
gataatttgagacaaacacttaaccagctgaagaatcaggtgcactcagctgttgaagaa
atggatgggctagacgacgtggagaacagcgtgctgtattacaaccaggcagtcgttctg
taccacctgcggcagcacacggaggccatatccgtcggcgagaagctctatcagttcata
gaaccttttgaagaaaaatttgcccaagcggtctgttttttgctggtagacctgtatata
ttaacctaccaagctgagaaggctttgcatcttcttgcagtcctagaaaaaatgatatca
caaggcaacaataataaaaacgggaagaatgagaccggtaacaataccagcaaagatgga
tcaaatcacaaagctgagagtggagctgtgatagaagccgcgaagtcaaagatacatcag
tacaaagtgagagcttatatccagatgaagtccttgaaggcctgcaaaagggagatcaag
tcagtcatgaacacagctggaaattcggcaccctctctctttcttaaaagcaattttgag
tacttgcggggcaattaccggaaagctgtgaagctcctaaacagttccaacatcgccgag
cacccaggattcatgaaaacaggtgaatgcctgaggtgtatgttctggaacaatctgggt
tgcatccactttgccatgagcaagcacaatctggggattttctactttaagaaggccctg
caggagaatgataacgtctgtgcacagctcagtgcaggcagcgctgacccgggcagaaaa
ttttccggaagacccatgtgcacgttgctgaccaacaagaggtatgagttgctgtacaac
tgtgggatccagcttctccacattggaaggccccttgctgcctttgagtgtctgattgag
gctgtccaggtttatcatgcaaatccacgcctgtggcttcggctggctgagtgctgcatt
gctgccaataaggggacttctgaacaagaaactaaaggtcttccaagcaaaaaaggaatt
gttcagtctattgttggtcaaggctatcatcgtaaaatagtcctggcatcacagtccata
cagaacactgtatataatgatggacagtcttccgctatccctgtagccagcatggagttt
gcagccatttgtctcaggaatgccttgttgctattacctgaagaacagcaagacccaaaa
caggaaaatgggtctaaaaatagtagccaactaggtggaaccacagaaagcagcgacagc
agtgagacctgcagcagtaaaagccatgatggagataaattcattccagctccaccgtca
tcaccactgagaaagcaggaattagaaaacttgaagtgctccatactggcttgcagtgct
tacgtggctctggctttgggcgataaccttatggctttgaaccacgcagataaacttctt
cagcagcccaagctgtcaggatctcttaagtttctgggccatctctacgctgcagaagcc
ctcatctcgctcgacaggatatctgacgccatcactcacttgaacccggagaacgtcact
gatgtctccttagggatctcctcaaacgagcaggaccaaggatcggacaaaggtgaaaat
gaaccaatggaatcctccgggaagcgggcccctcagtgctaccccagttccgtcaactcc
gccaggaccgtgatgctgttcaacctgggtagcgcctactgcttgaggagcgagtacgac
aaagcccgcaagtgtctacaccaggcggcgtccatgatccacccgaaggaggtgcccccg
gaggccattctgctggccgtgtacctggagctgcagaacggcaacacccagctggccttg
cagatcatcaaaaggaatcagctgctgcccacggtgaaggcacactcggagctgagaaag
aaggcagtgttcccgcccacccacccgatccagcccatccagatgccggccttcaccact
gtgcagagaaagtga
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