Oryctolagus cuniculus (rabbit): 100347725
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Entry
100347725 CDS
T03373
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-4-like
Organism
ocu
Oryctolagus cuniculus (rabbit)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Sde0182_C
Cadherin_C_2
MLD
Motif
Other DBs
NCBI-GeneID:
100347725
NCBI-ProteinID:
XP_051700253
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Position
3:22816987..22981533
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AA seq
805 aa
AA seq
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MKYFWAIRQESRCLLPWFLLLTAWRAGSAQLRYSVPEEAQHGTFVGRLAQDLGLPLAELV
PRLFRVASRAGGDLLEVNVQNGILFVNARMDREALCGRSAECSVHLEVVVERPLQVFHVE
VEVRDVNDNPPVFPMAVKHLFIAESRPLGSQFPLEGASDADVGANAQLTYTLSPNEYFSL
EKPSDSERVQGLGLVLRKSLDREEAPEIFLVLRVADGGKPELTGTAELLITVLDANDNAP
VFDKALYVVKLPENVPNATLVIRVNASDLDEGLNGDIIYSFSTDVSQNVKSKFHIDAVTG
QVIVKGNIDFEESRSYEILVEGTDRGQPPLSGHCRVIVEVEDTNDNVPVLEFKSLSLPVR
EDAPVGTVIALITVSDRDSGANGQVSCALTPDVPFRLLSTFRNYYSLVLDSGLDRELVSG
YGVVVTARDAGSPALRASASVWVEVADVNDNAPAFAQAEYTVFVRENNAPGCHLVTVSAR
DADARENARVSYSLVERRVGERLLSSYVSVHAESGRVHALQPLDREELELLRFEVSARDA
GVPALGSNVTLQVFVLDENDHAPWVLPRGAGGPASEAVPVWVSRSAGAGHVVAKVRAVDA
DAGYNAWLSYELQAAPNGAAPGGARLPFRVGLYTGEISTTRSLDEADLARQRLLVLVKDH
GEPALTATATVLLSLVDGGQAPAAASSRAAGVAGVAAAAGGAAALLDVNASLIVAICAVS
SLLVLTLVVWTALRCWAPAAEGACGPGQPALVCASAVGSWSCSQRRRQRVSGGRARPRPT
SWPSAPVYLTLGTESFSRRQTGIPL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatttctgggcgattcgtcaggaatccagatgcctgctgccctggttcctgctg
ctcacagcctggcgggcgggcagcgcccagctgcgctactcggtccccgaggaggcccag
cacggcacgttcgtgggccgcctggcgcaggacctggggctgccgctggccgagctggtg
ccgcgcctgttccgggtggcgtccagggccggcggggacctgctggaggtgaacgtgcag
aacggcatcctgttcgtgaacgcgcggatggaccgcgaggcgctgtgcgggcggagcgcg
gagtgcagcgtgcacctggaggtggtggtggagcggccgctgcaggtgttccacgtggag
gtggaggtgagggacgtcaacgacaacccgcccgtgtttccaatggccgttaaacatctg
ttcattgcggaatccagacctcttggttctcagtttccactggagggcgcgtccgatgca
gacgtcggagccaatgcgcagctgacctacacgctgagccccaatgagtacttttcgctg
gaaaaaccatctgacagtgagcgggtacaaggccttggccttgtattacgaaagtcacta
gaccgagaggaagctccggagatttttttagtgctcagggtcgcagatgggggcaagcct
gagttgaccggaaccgccgaattactcatcacggtactggacgcaaacgacaacgccccg
gttttcgacaaagcactctacgtggtgaaattaccggaaaatgtccccaatgccacgttg
gtaattagagtgaatgcctcggatctagatgaaggcttgaatggggatattatttattca
ttctcaactgatgtttcccaaaacgtgaagtccaagttccacatagacgcagttactgga
caggtgattgtgaagggaaatattgattttgaagaaagccgatcctatgagattctcgta
gagggcactgacagaggacaacctccactctccggtcattgtagagtgattgtggaagta
gaagacaccaatgataatgtgccagtcttggaattcaagtcgctgtcccttccagtccga
gaggacgctccggtgggcacggtgatcgccctcatcactgtctccgaccgcgactcgggc
gccaacgggcaggtgagctgcgccctgacgcccgacgtgcccttcaggctgctgtcgacc
ttcaggaactactactcgctggtgctggacagcgggctggaccgcgagcttgtgtcgggc
tacggcgtggtggtgacggcgcgcgacgcgggctcgccggcgctgcgggcgtcggccagc
gtgtgggtggaggtggcggacgtgaacgacaacgcgcccgcgttcgcgcaggccgagtac
acggtgttcgtgagggagaacaacgcgccgggctgccacctggtgacggtgtcggcgcgc
gacgcggacgcgcgggagaacgcgcgcgtgtcgtactcgctggtggagcggcgcgtgggc
gagcgcctgctgtcgagctacgtgtcggtgcacgcggagagcgggcgcgtgcacgcgctg
cagccgctggaccgcgaggagctggagctgctgcgcttcgaggtgagcgcgcgcgacgcg
ggcgtgccggcgctgggcagcaacgtgacgctgcaggtgttcgtgctggacgagaacgac
cacgcgccgtgggtgctgccgcggggcgcgggcgggccggcgagcgaggcggtgccggtg
tgggtgtcgcggtctgcgggcgcgggccacgtggtggcgaaggtgcgcgcggtggacgcg
gacgccggctacaacgcgtggctgtcctacgagctgcaggcggcgccgaatggggcggcg
ccgggcggggcgcgcctgccgttccgcgtggggctgtacacgggcgagatcagcacgacg
cgcagcctggacgaggcggacttggcgcgccagcggctgctggtgctggtgaaggaccac
ggcgagcccgcgctgacggccacggccacggtgctgctgtcgctggtggacggcgggcag
gcgccggcggcggcgtcctcgcgggcggcgggcgtggcgggcgtggcggcggcggcgggc
ggcgcggcggcgctgctggacgtgaacgcgtccctgatcgtggccatctgcgccgtgagc
agcctgctggtgctgacgctggtggtgtggacggcgctgcggtgctgggcgccggcggcg
gagggcgcgtgcgggccggggcagcctgcgctggtgtgcgcgagcgcggtggggagctgg
tcgtgctcgcagcggaggcggcagcgggtgagcggcggcagggcgcgcccaaggccgacc
tcatggccttcagccccagtttacctgaccctgggcacagagagcttcagcaggaggcaa
acggggattccactgtaa
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