Oryctolagus cuniculus (rabbit): 100349354
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Entry
100349354 CDS
T03373
Gene name
CSTF1
Definition
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100349354 (CSTF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100349354 (CSTF1)
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100349354 (CSTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CSTF1_dimer
ANAPC4_WD40
Frtz
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
100349354
NCBI-ProteinID:
XP_008272371
Ensembl:
ENSOCUG00000011351
LinkDB
All DBs
Position
Un
AA seq
431 aa
AA seq
DB search
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
LRLYDINTFQCFVSCNPQDQHTDAICSVNYNPSANMYVTGSKDGCIKLWDGVSNRCITTF
EKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAV
FNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRSTTD
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtacagaaccaaagtgggcctgaaggaccgccagcagctgtacaagctcatcatcagc
cagctgctctatgacggctacatcagcatcgccaacggcctcatcaacgagatcaagccg
cagtcggtctgtgcgccctccgagcagctcctgcatctcatcaaactaggaatggaaaat
gatgataccgccgttcagtatgcgatcggccgatcagacacagttgcccctggcacaggg
atcgacctggaatttgatgcagatgtccagaccatgtccccagaggcttccgagtatgaa
acgtgctatgtcacatctcataagggaccgtgccgcgtggctacctatagtagagatggg
cagttgatcgccacgggctctgccgatgcctccataaagatacttgacaccgaaaggatg
ttggccaaaagtgccatgccgatagaggtcatgatgaatgagactgcacaacagaatatg
gaaaaccaccccgtgattcgaactctctacgaccatgtggatgaagtcacatgtctcgct
ttccacccaacagaacagatcctggcctctggctcgagggattatactctgaaattattc
gattattccaaaccatctgcaaaaagggccttcaaatatattcaggaagcggagatgttg
cgctccatctctttccacccttccggagacttcatcctcgtcggcactcagcaccccacc
ctccgcctgtatgacatcaacaccttccagtgctttgtgtcctgcaatcctcaagaccag
cacaccgacgccatatgctctgtcaattacaatcctagtgccaacatgtatgtgactggc
agcaaggacggctgcatcaagctgtgggatggagtctctaaccggtgcatcacgactttt
gagaaggcacatgatggggctgaagtttgctctgccattttttccaaaaattctaaatac
atcctctcaagtggaaaagactctgttgctaaactttgggaaatatcaacaggacgaacg
ctggtcagatacacgggtgcggggttgagtggccggcaggtgcaccggactcaggccgtg
ttcaaccacaccgaggactacgtgctgctgccggacgaaaggacgatcagtctctgctgc
tgggactcgaggacagccgagcggagaaacctgctctccttggggcacaacaacatcgtg
cgctgcatcgtgcactcgcccaccaaccccggcttcatgacgtgcagcgacgacttcaga
gcgcgcttttggtacaggaggtcgaccactgactga
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