Oryctolagus cuniculus (rabbit): 100354472
Help
Entry
100354472 CDS
T03373
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100354472
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocu03032
]
100354472
Enzymes [BR:
ocu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100354472
DNA replication proteins [BR:
ocu03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
100354472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-DNA_Pol
DNA_pol_alpha_N
DUF1744
MTR4_beta-barrel
DNA_pol_B_exo2
PP-binding_2
Motif
Other DBs
NCBI-GeneID:
100354472
NCBI-ProteinID:
XP_008270692
Ensembl:
ENSOCUG00000015209
LinkDB
All DBs
Position
X:10582528..10911939
Genome browser
AA seq
1466 aa
AA seq
DB search
MAPIHGNDSELGASDSGSFVASRARREKKSKKGRQEALERLKKAKAGEKYKYEVEDFTSV
YEEVDEEQYSKLVQARQDDDWIVDDDGIGYVEDGREIFDDDLEDDTLDASEKGKDVKIHS
KGKRNVKKPSVTKPNNIKTMLIAGAGKKTADKAVDLSKDDLLGDILQDLNTETPQITPPP
VIIPKKKRSLGASLNPFSVRPSKAVPSGKSASPVVGKVPPLTPAPHKRAEFVGDVVQGEP
REDEQEPGAMEFEDGDFDEPMESEEVDIEPVAAKTWAQESEPAEAVQDVADPGRESTSYL
GSFLPDVSCWDIDQEDDSSLSAQEVEVHVDSSHLPLVKGADEEQVFQFYWLDAYEDQYNQ
PGVVFLFGKVWIESAKTHVSCCVTVKNIERTLYFLPREMKMDLNTEKETGTSVTMKDVYD
EFDEKIATKYRIMKFKSKIVEKNYAFEVPDVPEKSEYLEVRYSAELPQLPQDLKGETFSH
VFGTNTSSLELFLMNRKIKGPCWLEVKNPQLLNQSVSWCKVEAMALKPDLVNVVKDVSPP
PLVVMSFSMKTMQNAKSHQNEIIAVAALVHHSFALDKAPPQPPFQSHFCVVSKPKDCIFP
YAFTEVIKEKNVKVEVAATERTLLGFFLAKVHKIDPDIIVGHNIYGFDLEVLLQRINMCK
VPHWSKIGRLKRFSMPKLGGRSGFGERNATCGRMICDVEISAKELIRCKSYHLSELVQQI
LKTERTVIPMENVQNMYSEPSHLLYLLEHTWKDAKFILQIMCELNVLPLALQITNIAGNV
MSRTLMGGRSERNEFLLLHAFYENNYIVPDKQIFRKPQQKLGDEDEMDGDTDKYKKGRRK
AAYAGGLVLDPKVGFYDKFVLLLDFNSLYPSIIQEFNICFTTVQRVVSEAQKVTEDGEQE
QIPELPDPGLEMGILPREIRKLVERRKHVKQLMKQQDLNPDLVLQYDIRQKALKLTANSM
YGCLGFSYSRFYAKPLAALVTYKGREILMHTKEMVQKMNLEVIYGDTDSIMINTNSTNLE
EVFKLGNKIKNEVNKLYKLLEIDIDGVFKSLLLLKKKKYAALVVEPTSDGNYITKQELKG
LDIVRRDWCDLAKDTGNFVIGQILSDQSRDTIVENIQKRLIEIGENVLNGSVPVNQFEIN
KALTKDPQDYPDKKSLPHVHVALWINSQGGRKVKAGDTVSYVICQDGSNLTASQRAYAPE
QLQKQDNLTIDTQYYLAQQIHPVVARICEPIDGIDAVLIATWLGLDPTQFRVSHYHKDEE
NDALLGGPAQLTDEEKYKDCEKFKCPCPTCGTENIYDNVFDGLGADMEPSLYRCSNINCK
ASPLTFVVQLCNKLVMDIRRCIKKYYDGWLVCEEPMCRNRTRHLPLQFSRNGPLCPACTK
ATLRAEYSDKTLYTQLCFYRYIFDVDCALEKLITDHEKEKMKKQYLTQKVLQDYRKLKNT
AEQFLLRSGYSEVNLSKLFADCAVKS
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccatacacggcaacgattccgagctgggggcgagcgattcagggagttttgta
gcttctcgagcccggcgagaaaaaaaatcaaagaaaggacgccaggaagctttggagaga
ctgaaaaaggctaaagctggtgagaagtataaatatgaagtcgaggacttcacaagtgtt
tatgaagaagttgatgaagaacagtattctaagctggttcaggcacgccaggatgacgac
tggattgtggatgatgatggtatcggctatgtggaagatggccgagagatttttgatgat
gaccttgaagatgatacccttgatgccagtgagaaaggaaaggatgttaaaatacacagc
aaaggcaagaggaatgtaaagaagccttcagtgacaaaaccaaacaatatcaagaccatg
ctcattgctggtgctggaaagaaaaccgcagataaagctgtagacttgtccaaggatgat
ctacttggggacatcctacaggatctgaacactgagacacctcagataactccaccacct
gtaataataccaaagaagaaaagatcccttggagcgtcgctgaatcctttttctgtgcgt
ccctccaaggcagttccttcaggaaaatctgcttcccctgtcgtcgggaaggtgcctcca
ttaactcctgctcctcataaacgtgccgagtttgttggagatgtggtgcagggagagcca
cgagaagatgagcaggagccaggggcaatggagtttgaagatggcgactttgatgagccc
atggagtccgaggaggtggacatagagcctgttgctgccaagacatgggcgcaagagagt
gagccagcagaggcagtgcaagacgtggcagatcctggcagagagagcacgtcttactta
ggaagtttcctgccagatgtctcctgttgggacattgatcaggaagatgacagcagtttg
tcagctcaggaagtggaagttcatgtggattccagtcacctcccgttggtaaaaggggca
gatgaagaacaagtgttccagttttattggctggatgcttatgaagatcagtacaaccaa
ccaggtgtggtatttctgtttggcaaggtttggattgaatcagccaaaacccacgtgagc
tgttgtgttacagtgaaaaacattgagagaacactctatttccttccccgtgaaatgaaa
atggatctaaatacagagaaagaaacaggaacttcagttaccatgaaggatgtttatgat
gagtttgatgagaaaatagcaacaaaatacagaatcatgaaattcaagtccaagatagtg
gaaaagaactatgcttttgaggtacctgatgttccagaaaaatctgagtacttagaagtt
agatactcggctgaattgccacagcttcctcaggatttgaaaggagaaactttttctcat
gtatttgggaccaacacgtccagcttagaattatttttgatgaacagaaagatcaaagga
ccgtgttggcttgaagtaaaaaatccacaactcttgaatcagtcagtcagttggtgcaaa
gttgaggcaatggctttgaaaccagacttggtgaatgtcgtcaaagatgtcagtcctccc
ccacttgtggtgatgtctttcagcatgaagactatgcagaatgcaaagagccatcaaaat
gagattatcgctgtggccgctttggtccatcacagttttgccctggataaggcgccccca
cagccccccttccagtcacacttctgtgttgtgtctaaaccaaaggactgtattttccca
tatgctttcacagaagtcattaaggaaaagaatgtgaaggttgaggttgccgcaacagaa
agaacactgctgggttttttccttgcaaaagttcacaaaattgatcctgatatcattgtg
ggtcataatatttatgggtttgatctggaagtactactgcagagaattaacatgtgcaaa
gttcctcactggtccaagataggtcgactgaagcgattcagcatgccaaagcttgggggc
cggagtggatttggtgaaagaaatgctacctgtggccgaatgatctgtgatgtggaaatt
tcagcaaaggaattgattcgttgtaaaagctaccatttgtccgaacttgttcaacagatt
ctgaaaactgaaagaactgtgattccaatggaaaatgtacaaaatatgtatagtgaacct
tctcatctgttgtacctgttggagcacacctggaaagatgccaagttcattttgcagatt
atgtgtgagctaaatgttcttccattagcattgcagatcactaacatcgccgggaacgtt
atgtccaggacactgatgggtggacgatctgagcgtaatgagttcttgttgcttcatgcg
ttttatgaaaacaactatattgtgcctgacaagcagattttcagaaagcctcagcaaaaa
ctgggtgatgaagatgaaatggatggagacactgataaatacaagaaaggacgtaggaaa
gcagcttatgctggaggtttggtcttggaccccaaagttggtttttatgataaattcgtt
ttgcttctggacttcaacagtttatatccttccattattcaggaatttaacatctgtttt
acaacagtgcaaagagttgtttcagaggcccagaaagttacagaggatggagaacaagaa
caaatccctgagttgccagatccaggcttagaaatgggcattttgcccagagagatccgg
aaactggtagagcggagaaaacatgtcaaacagctaatgaaacagcaagatttaaatcca
gaccttgttcttcagtatgacattcgacagaaggctttgaagcttacagcgaacagtatg
tacggttgcctgggattttcctacagcaggttttacgccaaaccactggctgccttggtg
acatacaaaggaagagagattttgatgcatactaaagagatggtacagaagatgaatctt
gaagttatctatggagatacagattccattatgataaacaccaatagcaccaatttggaa
gaagtatttaagctgggaaacaagataaaaaacgaagtcaataagttgtataagctgctt
gaaatcgacattgatggtgtattcaagtcactgctactgctgaagaaaaagaaatacgca
gctctggttgttgaaccaacatcggatgggaattacattaccaaacaggagctgaaaggg
ttggatatagttaggagagattggtgtgatcttgctaaagacactggaaactttgtcatt
ggccagattctctctgatcaaagccgggacacgatagtcgaaaacattcagaagaggtta
atagaaattggagaaaatgtgctaaatggcagtgtcccagtgaaccagtttgagattaac
aaggcattaacaaaggacccccaggattaccctgataagaaaagcctaccccatgtacat
gttgcactctggataaattctcaaggtggcagaaaggtgaaagctggagatactgtttcc
tatgtcatctgtcaggatggctcgaacctcacggccagccagagggcctatgctcctgag
cagctgcagaaacaggacaatttaaccattgacacccagtactatttggcccagcagatc
cacccagttgtggcgcgaatctgtgagccaatagatggaattgatgctgtgcttattgcc
acctggttaggcctcgaccccacccagtttagagtttctcattatcataaagatgaagag
aatgatgctttacttggtggcccagcccagctcactgatgaagagaaatacaaggactgt
gaaaaattcaaatgtccatgccctacatgtggaaccgagaatatttatgataatgtcttt
gatggtttgggagccgatatggagcccagtttgtatcgttgcagtaacatcaactgtaaa
gcttcacctctgacctttgtggtacagctgtgcaacaaattggtcatggacattagacgt
tgcattaaaaagtactatgatggctggttggtatgtgaagagccaatgtgtcgcaatcga
actcggcaccttcccctccagttctcccgaaatggacctctttgcccagcttgcacgaaa
gctacacttagagcagagtattctgacaagaccctgtacacccagctgtgcttttaccgg
tacatttttgatgtggactgtgcgctggagaaacttattaccgatcatgagaaagaaaaa
atgaagaagcagtatcttacccaaaaagttcttcaggactacagaaaactcaagaacaca
gcagagcagttcttgctgcgaagtggctactccgaagtgaacctcagcaaactcttcgcc
gattgtgctgtgaagtcctga
DBGET
integrated database retrieval system
