KEGG   Oryctolagus cuniculus (rabbit): 100355877Help
Entry
100355877         CDS       T03373                                 

Gene name
SETDB1
Definition
(RefSeq) SET domain bifurcated 1
  KO
K11421  histone-lysine N-methyltransferase SETDB1 [EC:2.1.1.43]
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu00310  Lysine degradation
ocu04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    100355877 (SETDB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    100355877 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ocu03036]
    100355877 (SETDB1)
Enzymes [BR:ocu01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.43  histone-lysine N-methyltransferase
     100355877 (SETDB1)
Chromosome and associated proteins [BR:ocu03036]
 Eukaryotic Type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     100355877 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100355877 (SETDB1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: DUF5604 SET Tudor_4 TUDOR_5 Pre-SET MBD DUF4537 53-BP1_Tudor
Motif
Other DBs
NCBI-GeneID: 100355877
NCBI-ProteinID: XP_002715622
Ensembl: ENSOCUG00000003642
UniProt: G1T430
LinkDB All DBs
Position
13
AA seq 1292 aa AA seqDB search
MASLPGCIGLGAAAAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQFRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPMEPPQPTAPPAPPIPPTSPLSPQAGDAESLES
QLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSESAPGGKPAVNQTYRSPLGSSASAPA
PPAPPAPPAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRIRPMRNEQYR
GKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFL
EMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGK
GVFINTGPEFLVGCDCKDGCRDKSKCVCHQLTIQATACTPGGQINPNSGYQYKRLEECLP
TGVYECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGK
ILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGT
EDAEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEMAAKDSRPPDLGPP
HMPVPPSVPVGVCNPPSSEETPKNKVASWLSCNSISDGAFDSDSRSSFKTGEGSAGGGRG
EAEKATASALGIKDEGDVKQTKKEEPDDRSKTSGATESSRNYGYNPSPMKPEGLRRPPSK
TNLHQSRRLMASAQANTDDVLTLSSSTESEGESGTSRKPTAGQTAATAVDSDDIQTISSG
SEGDDFEDKKNMSGPTKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGDSAPVRKNTRQ
FYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGT
ELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 3879 nt NT seq  +upstreamnt  +downstreamnt
atggcatccctgcctgggtgtattggcttgggtgcagccgcagccgcagtggagtcggaa
gagattgcagagctgcagcaagcagtggttgaagagctgggtatctccatggaggaactc
cggcagttcattgatgaagaactggagaagatggactgtgtccagcagcgcaagaagcag
ctagccgagttggagacgtgggtaatacagaaagagtctgaggtggctcatgttgaccag
ctctttgatgatgcatccagggcagtgactaattgtgagtctttggtgaaggacttctac
tccaagctgggactacaatatcgagacagtagctctgaagacgaagcttcccggcctaca
gaaataattgagattcctgatgaagatgatgatgtccttagtattgattcaggtgatgct
gggagcagaactcctaaagatcagaagctccgtgaagctatggctgctttaagaaaatca
gctcaagatgtccagaagttcatggatgctgtcaacaagaagagcagttcccaggatcta
cacaaaggaaccttgagtcagatgtcgggtgaactgagcaaagatggtgacctgatagtc
agcatgcggattctgggcaagaagaggaccaagacgtggcacaaaggcaccctgattgcc
atccagacggtcgggccagggaagaagtacaaggtgaaatttgacaacaaaggaaagagt
ctgctgtcagggaaccatattgcctatgattaccaccctcccgctgacaagctgttcgtg
ggcagtcgagtggtggccaagtacaaagatgggaaccaggtctggctctatgctggcatt
gtagccgaaacaccaaacgtcaaaaacaagctcaggtttctcattttcttcgatgatggc
tacgcatcctatgtcacacagtctgaactgtatcccatttgccggccattgaagaagact
tgggaggacatagaagacgtctcctgccgagacttcatagaggagtatatcactgcctac
cccaaccgacccatggtgctgctcaagagtggacagcttatcaagactgagtgggagggc
acatggtggaagtcacgagttgaggaagtggacggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgagtggatctatcgaggctctacacggctggagcccatgtttagc
atgaagacatcttcggcctctgcactggaaaaaaagcaagggggacagttcaggacacgt
ccaaatatgggtgcggtgagaagtaaaggccctgttgtccagtatacacaggatctgacc
agtactgggacccaattcaagccaatggagcccccacagcctacagccccacctgcccca
cccatcccacctacttcacctctgtcgcctcaagcaggtgacgctgaaagcttggaaagc
cagcttgctcaatcacggaagcaggtagccaaaaagagcacatcctttcgaccaggatct
gtgggctctggtcattcctcccctacatcccctgcactcagtgaaagtgcccctggtggg
aaacctgcagtcaaccagacgtataggtcacctttaggttcatcagcctctgccccagca
cccccggctcctccagcacccccagcacccccagcacccccagccttccatggtatgctg
gagcgggcccctgcagagccctcctaccgtgcccccatggagaagcttttctacttacct
cacgtctgcagctatacttgtctgtctcggatcagacctatgaggaatgagcagtaccgg
ggcaagaaccctctgctggtcccactactgtacgacttccggcgaatgacagcccggcgc
cgggttaatcgcaaaatgggctttcatgttatctataagacaccctgcggcctctgcctt
cggacaatgcaggagattgaacgctacctttttgagactggctgtgacttcctctttctg
gagatgttctgtttagatccatatgttcttgtggaccggaagtttcagccctataaacct
ttttactatatcttggacatcacctacgggaaggaagatgttcccctatcctgtgtcaat
gagattgacacaactcctccaccacaggtggcctacagcaaggaacggatccctggcaag
ggtgttttcattaacacgggccctgagtttctggtcggctgcgactgcaaggatgggtgt
cgggacaagtctaagtgtgtctgccatcagctaactatccaggctactgcttgtacccca
gggggtcagatcaaccctaactctggctaccagtacaagagactagaagagtgtctgccc
acaggggtatatgagtgtaacaaacgctgcaaatgtgacccaaacatgtgcacaaaccgg
ttggtgcagcatggactacaggttcgcctacagctattcaagacacagaacaagggctgg
ggtatccgctgcttggatgacattgccaaaggctcttttgtttgtatttatgcaggcaag
atcctgacagatgactttgcagacaaggaaggcttggaaatgggtgatgaatactttgca
aatctggaccatatcgagagcgtggagaacttcaaggaaggatatgagagtgatgccccc
tgttcctctgacagcagtggtgtagacttaaaggaccaggaagatggtaacagtggtaca
gaggatgctgaggagtccaatgatgatagctcagatgacaacttctgtaaggatgaggac
ttcagcaccagctcagtgtggcgcagctatgctacccggaggcagacccgaggccagaag
gaaaatggactgtctgagatggctgccaaagactcccgtcccccagaccttgggccacca
catatgcctgtccctccctcagtccctgtaggtgtctgcaacccaccttcctccgaggag
acacccaagaacaaggtggcctcgtggctgagctgcaatagtatcagtgacggtgctttt
gactctgatagccgctcctccttcaagactggtgaaggtagcgctgggggaggccgaggg
gaagctgagaaagccaccgcctcggcactgggcatcaaggacgagggggacgtcaagcag
accaagaaggaggaacctgatgaccgaagcaagacatcaggagctactgaaagctctaga
aattatggttacaatccttctcccatgaagccagaaggacttcgccgcccaccgagtaag
acaaatctacatcagagccgacgactcatggcctctgctcaggccaacactgatgatgtt
ctgacactgtccagcagcacagagagtgagggggaaagtgggaccagccggaagcccacc
gctggtcagactgcagccacggcggttgacagtgatgacatccagaccatctcctccggc
tccgaaggagatgactttgaggacaaaaagaacatgtctggtccaaccaagcgccaggtg
gcagtaaagtcaacccggggctttgctcttaaatcaacccatgggattgctattaagtca
accaacatggcctctgtggagaagggagatagcgccccagttcgtaagaacacacgccag
ttctacgatggtgaggagtcttgttacatcattgacgccaagcttgaaggcaacctgggc
cgctacctcaatcacagttgcagccccaacctgtttgtccagaatgtcttcgtggacacc
catgatcttcgcttcccttgggtggccttctttgccagcaagagaatccgggctgggacg
gaactgacgtgggactacaactacgaggtgggcagtgtggaaggcaaggagctgctctgc
tgctgtggcgccatcgaatgcagagggcgtcttctctag

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