Oryctolagus cuniculus (rabbit): 100356761
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Entry
100356761 CDS
T03373
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocu04121
]
100356761
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100356761
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
100356761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-C3HC4_4
Phytase-like
Motif
Other DBs
NCBI-GeneID:
100356761
NCBI-ProteinID:
XP_002722861
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MVSQGSAPSLLEALSSDFLACKICLEQLRAPKTLPCLHTYCQDCLAQLADGGHIRCPECR
ETVPVPPAGVAAFKTNFFVNGLLDLVKARGDLRAGKPACALCPLVGGTSAGGPATARCLD
CADDLCQACADGHRCTRQTHSHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFLCQ
PCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEELLAGVDKNLAELEAARASEKEALA
RLREQAARVGLQVEEAAEGVLRALLAQKQEVLGRLRAHVEAAEEAAWERLAELESREQVA
QAAAAFARRVLSLGREAEILSLEGAIAQRLRQLQDSPWAPGPAPCLLPRLELHPGLLDKD
CHLLQLSFEELPPREDDERAGADTQGGDGTQSPREDRAEAQPLKEEKAQAAPEDGGSQAP
KEDTTAKVSQAEKAQVTPKEDRAQSPQGDRESHMERGARANKKRKFKGRLKSISREPSPA
PGPNLEGTGLLPRPIFFCSFPTRMPGDRRSPRITGLCPFGQREILVADEQNRALKRFSLN
GDYKGTVPVPEGCSPCSVAALQGVVAFSAGARLYLISPEGEVQWRRALSLSQASHAVAAL
PSGDRVAVSVAGHVEVYNMEGSLATRFIPGGRASRGQRALVFLTASPQGNFVGSDWQQNS
VVVCDGLGQVIGEYRGPGLHGCQPGSLTVDKKGYIFLTLREINKVVILDPKGSLLGDFLT
AYHGLEKPRVTTMVDGRYLVVSLSNGTIHVFRVRSPDS
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccagggctccgcgccctccctgttggaggccctgagcagcgacttcctggcc
tgcaaaatttgcctggagcagctccgggcacccaagacactgccctgcctgcacacctac
tgccaggactgcctggcacagctggccgatggcggccacatccgctgccccgagtgccgc
gagaccgtgcccgtgccgcccgccggcgtggccgcctttaagaccaacttcttcgtcaac
gggctcctggacctggtgaaagccaggggagacctgcgggcaggcaagccagcctgtgcc
ctgtgccctctggtcgggggcaccagcgccggggggccggccacggcccgctgcctggac
tgcgccgacgacctgtgccaagcctgtgctgacgggcaccgctgcacccgccagacccac
agccaccgcgtggtggacctggtgggctacagggcaggctggtatgacgaggaggcccgg
gagcgccaggctgcccagtgtccccagcacccgggggaggccctgcgcttcctgtgccag
ccctgctcgcagctgctgtgccgcgagtgccgcctggacccacacctggaccacccctgc
ctgcccctggccgaggcagtgcgcgcccgcaggccaggcctcgaggagctcctggcgggc
gtggacaaaaacctggcggagctggaagccgcccgggcatcggagaaggaagcgttggcc
cggctgcgggagcaggcggccagggtggggctgcaggtggaggaggcggccgagggcgtc
ctccgggccctgctggcccagaagcaggaggtgctggggcggctccgggcccacgtggag
gctgccgaggaggctgcctgggagaggctggcagagctggagagccgggagcaggtggcc
caggcggccgccgcctttgcccgcagggtgctcagcctgggtcgcgaggccgagatcctg
tcgctggaaggagccatcgcccagaggctccggcagctacaggacagtccctgggcccct
gggccagccccatgcctgctgccgcggctggagctccaccctgggctcctggacaaggac
tgccacctgctccaactctcctttgaggagctgccaccccgggaggatgacgagagagca
ggtgctgacacccagggaggggacggaacccagagccctagagaggaccgggccgaggcc
cagcccctgaaagaggaaaaagcccaggcagccccggaagatggaggctcccaggctccc
aaagaggacaccacggccaaggtgtcccaagcagagaaagcccaggtgaccccgaaggag
gacagagcccagtcgccccaaggagaccgagaatcccacatggagaggggtgccagggcc
aacaagaagaggaagtttaagggcaggctcaagtccatttcccgggagcccagccccgcc
ccggggcccaacctggaaggcaccggcctcctgcctagacccatcttcttctgcagcttc
cccacgcgcatgccgggagaccggaggtccccacgaatcaccgggctctgccccttcggc
cagcgggagatcctggtggcagacgagcagaacagggcactgaaacgcttctccctcaac
ggcgactacaagggcaccgtgcctgtccccgagggctgctccccgtgcagtgtggccgcc
ctgcagggggtggtggccttctctgctggtgcccggctctaccttatcagccccgaaggc
gaggtgcagtggcgccgggcgctgagcctgtcccaggccagccacgcggtggctgcgctg
cccagcggggaccgggtggcagtcagtgtagcaggccacgtggaggtgtacaacatggag
ggcagcctggccacccgcttcatccccgggggcagggccagccgtgggcagcgggcactg
gtgttcctcaccgccagcccccagggcaacttcgtgggctcagactggcagcagaacagc
gtggtggtgtgcgacgggctgggccaggtaatcggggagtaccgggggccgggcctgcac
ggctgccagccgggctccctgaccgtggacaagaagggctacatctttctgaccctccga
gaaatcaacaaggtggtgatccttgaccccaaggggtcccttcttggcgacttcctcacg
gcctaccacggcctggaaaagccccgcgtgaccaccatggtggacggcaggtacctggtc
gtgtccctcagcaacgggaccatccatgtcttccgggttcgttctcccgacagttaa
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integrated database retrieval system
