KEGG   Oryctolagus cuniculus (rabbit): 103347805
Entry
103347805         CDS       T03373                                 

Gene name
MSH2
Definition
(RefSeq) mutS homolog 2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu01524  Platinum drug resistance
ocu03430  Mismatch repair
ocu05200  Pathways in cancer
ocu05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    103347805 (MSH2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    103347805 (MSH2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    103347805 (MSH2)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    103347805 (MSH2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocu03400]
    103347805 (MSH2)
DNA repair and recombination proteins [BR:ocu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     103347805 (MSH2)
SSDB
Motif
Pfam: MutS_V MutS_II MutS_I MutS_III MutS_IV AAA_27
Other DBs
NCBI-GeneID: 103347805
NCBI-ProteinID: XP_008252950
Ensembl: ENSOCUG00000009576
LinkDB
Position
2
AA seq 870 aa
MAVQPKDTLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLAAREVFKT
QGVVKYMGPAGSKTLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSSSIGVVGVKMSTVDGQRQVGVGYVDSMQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKKADFSSKDIYQD
LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTSGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERY
IIRKHQNLLLAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELRE
VMDDLEKKMQSTLISAARELGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVD
IQKNGVKFTNSKLSSFNEEYAKNKAEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLD
AVVSFAHASNGAPVPYVRPVILEKGQGRIILKASRHACVEVQDEVAFIPNDVHFEKDKQM
FHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLKGVS
TFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMFATH
FHELTALAHHIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHVIEC
AKQKAQELEEFQNIGESQAYDGMEPAAKKCYLEREQGEKIIQEFLYKVKQVPFTEMSEEN
ITIKLRQLKAEVIAKNNSFVNEIISRIKVT
NT seq 2613 nt   +upstreamnt  +downstreamnt
atggcggtgcagccgaaggacacgctgcagctggagagcgcggccgaagtcggcttcgtg
cgcttcttccagggcatgccggagaagcccaccactaccgtgcgccttttcgacaggggc
gacttctacacggcgcacggggaggacgcgctgctggccgcccgggaggtgttcaagacc
cagggggtggtcaagtacatggggccggcaggatcaaagaccctgcagagtgttgtgctt
agtaaaatgaattttgagtcctttgtaaaagatctccttctagttcgtcaatatagagtt
gaagtttataaaaatagagctggaaataaggcctccaaggagaatgattggtatttggca
tttaaggcttctcctggcaatctttcccagtttgaagatattctctttggtaacaatgat
atgtcctcttccattggtgttgtgggtgttaaaatgtccacagttgatggtcaaaggcaa
gttggagttggatatgttgattccatgcagaggaagctaggactgtgcgagttccctgat
aatgatcagttctccaatcttgaggctctcctgattcagattggaccaaaggaatgtgtt
ttaccgggaggagagactgccggagacatgggaaaactgagacaggttattcagagagga
ggaattctgatcacagaaagaaaaaaagctgacttttcttcaaaagacatttatcaggat
ctcaaccggttgttgaaaggcaaaaagggagaacaaatgaatagtgctgtgttgccagaa
atggagaatcaggttgcagtttcatcattatctgcagtaatcaagtttttagaactctta
tctgatgattctaattttggacaatttgagctgacaacttttgacttcagccagtacatg
aaattggatattgcagctgtcagagcccttaacctgtttcagggctctgttgaggatact
agtggctctcagtctctggctgcgttgctaaataaatgcaaaacccctcaaggacaacga
ctggttaaccaatggattaagcagcctctcatggataagaacagaatagaagagaggtat
attattagaaagcaccagaacttgttgctggcagtttttgtgactcctcttactgatctt
cgttctgatttctccaagtttcaggaaatgatagaaacaactttagacatggatcaggtg
gaaaaccatgaattccttgtgaaaccttcctttgatcctaatctgagtgagttaagagaa
gtaatggatgacttagagaagaagatgcagtcaacactaataagtgcagccagagagctc
ggcttggaccctggcaagcagattaaactagattccagtgcacagtttggatattacttt
cgagtaacctgtaaggaagaaaaggtccttcgtaacaataaaaactttagtacagtagat
atccagaagaatggtgtgaaatttactaacagtaaattgtcttctttcaatgaagaatat
gctaaaaataaagctgaatatgaggaggcccaggatgccattgttaaagaaattgtcaat
atttcttcaggctatgtagaaccaatgcagaccctcaacgatgtgctagctcagcttgat
gctgttgtcagctttgctcatgcgtccaatggagcacctgttccatatgtacgaccagtc
attttggagaaagggcaaggaagaattatattgaaagcatccagacatgcttgtgttgaa
gttcaagatgaagttgcatttattcctaatgatgtgcactttgaaaaagataaacagatg
ttccacatcattactggtcccaatatgggaggcaaatcaacgtatattcgccaaactggg
gtgatagtacttatggcccaaattgggtgttttgtgccgtgtgaatcagcagaggtgtcc
atcgtggattgcatcctggctcgggttggggccggtgacagtcagttgaaaggagtctcg
acgttcatggctgaaatgttggaaaccgcttcaatcctcagatctgcaactaaagattct
ttaataatcatagatgaattgggaagagggacctctacctacgatggctttgggctagca
tgggctatatcagattatattgcaaccaagatcggggctttttgcatgtttgcaacccat
tttcatgaactcactgccttggcccatcatataccaacagttaataatctacatgtcaca
gccctgaccactgaagaaaccttaaccatgctttatcaagtgaagaaaggtgtctgtgat
caaagctttgggattcacgttgcagagcttgctaatttccctaggcatgtaatagaatgt
gctaagcaaaaagcccaggaacttgaggagtttcagaatattggagaatcacaagcatat
gatggaatggagccagcagccaagaagtgctacctggaaagagagcaaggtgaaaaaatt
attcaggagtttctatacaaggtgaagcaagtgccctttactgaaatgtcagaagaaaac
atcacaataaagttaagacaactaaaagctgaggtgatagcaaagaataatagttttgta
aatgaaatcatttcacgaataaaggttacatga

DBGET integrated database retrieval system