Orrella dioscoreae: ODI_R3749
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Entry
ODI_R3749 CDS
T05133
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
odi
Orrella dioscoreae
Pathway
odi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ODI_R3749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
odi03400
]
ODI_R3749
Enzymes [BR:
odi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ODI_R3749
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ODI_R3749
DNA repair and recombination proteins [BR:
odi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ODI_R3749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
C1_2
Auto_anti-p27
Zn_ribbon_SprT
OrfB_Zn_ribbon
Motif
Other DBs
NCBI-ProteinID:
SOE51871
UniProt:
A0A1C3K312
LinkDB
All DBs
Position
I:4085134..4085961
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AA seq
275 aa
AA seq
DB search
MPELPEVETTRRGIAPLMTGRALKRLVIHESRLRWPIPPGLDVLLAERTVVACERRGKYL
LLRFEHGTQIIHLGMSGSLRRVPPGEFLRKHDHVEWIFEDAAFRLHDPRRFGAVLWHPTD
AGPLLEHPLLARLGIEPFDPRFNGEWLHRHFQGRAMAVKQALLAGDAVVGVGNIYASESL
FRARIHPATPAGRLSRARCDRLAQAVLQTLGDALTSGGSTLRDYVNSDSEPGAYFDIHAA
VYERAGQPCKVCGTPIRRIVQGQRATYYCPRCQRA
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgccagaagtcgaaaccacgcgccgcggcatcgcgccgctgatgacggga
cgggcgctcaagcgcctcgtcatccacgaaagccgcctgcgctggcccatcccgcccggc
ctggatgtcctgctggcggaacgcaccgtcgtggcctgcgaacggcgcggcaagtacctg
ctgctgcgcttcgagcatggcacgcagatcatccacctgggcatgtcggggtcgctgcgg
cgggtcccgccaggcgaattcctgcgcaagcacgaccacgtcgaatggatcttcgaggac
gcggcgttccggctgcatgacccgcgccgcttcggcgcggtgctctggcaccccaccgat
gccggcccgctgctggaacatcccctgctggcccggctgggcatcgaacccttcgacccg
cgcttcaacggcgagtggctgcaccgccatttccaaggccgcgcgatggcggtcaagcag
gccctgctggcgggcgacgccgtcgtgggcgtgggcaacatctatgcgtcggagtcgctg
ttccgggcgcgcatccaccccgccacgcctgccggccgcctgtcacgggcccgctgcgac
cggctggcccaggcggtgctgcagacattgggcgacgccctgacctcgggcggcagcacg
ctgcgcgactacgtcaacagcgacagcgagccaggggcctatttcgatatccacgccgcc
gtctacgaacgcgcgggccagccctgcaaggtctgcggcacgccgatccgccgcatcgtg
cagggccagcgcgccacctattactgcccccgctgtcagcgggcctga
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