Orrella dioscoreae: ODI_R4268
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Entry
ODI_R4268 CDS
T05133
Name
(GenBank) Soluble lytic murein transglycosylase precursor
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
odi
Orrella dioscoreae
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
odi01011
]
ODI_R4268
Enzymes [BR:
odi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ODI_R4268
Peptidoglycan biosynthesis and degradation proteins [BR:
odi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ODI_R4268
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Motif
Other DBs
NCBI-ProteinID:
SOE52529
UniProt:
A0A1C3K5W6
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All DBs
Position
I:complement(4681562..4683619)
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AA seq
685 aa
AA seq
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MRADTMFLVSELRKYQKSGRGVLARGRGAGALTLAVISAALGAAVGAAPAAAQTVRQAVQ
PAQPQTPQEAVAAARDAVNKRQWAQLPPLVSRAKGDPLAMYAEYWLLRYRLNASSVPTPA
ADLEDFMRRNQGAYLADRLRGDWVLAATRSGDFATARRLGEVVAATDQVKCAQLEAAHLG
GQRATPAQAQAVFTPGSACWDLYDQLVADRVLGPQQLIPALRDALEANKRDDARRYAVYV
FEPAQLRDYDALMKDPMKWLVRQPRPVKGDMERELVAVALSRLARSDMTPGEAYLRREWE
GLPRELKQWVYSQFALVAVLNLDDRAHEWYKHAGDVRMSEYNHAWRVRAALRQPKIDWAW
VMKSISQMPASQQAEPVWVYWHARGLQATGHPEQARKQYESIAPGFNFYGQLAAEELGRV
ITVPARPSPLTDAEIAEARGHAGLQRAVALFKLGWRPEAVPEWNYSLRGMNDRQLMAAAE
LARQEGIYDRVVNTSERTESEFDFTQRFIAPFEGRVSAQARQISLDPAWVYGLIRQESRF
ITDARSVVGASGLMQLMPATAKWVAKRIGMTDFQPSRVNEFEVNTILGTNYLNMVLGDLN
GSQVLASAGYNAGPGRPRLWRSRLSHPVEGAIFAETIPFTETRLYVKNVLSNATYYAALF
TGEPQSLKARLGHIAPQRNERTALP
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcgggctgacacgatgttcctggtttcagagctacgaaagtatcagaaatccggccgg
ggcgtcctggcgcgcggccgcggggccggtgcgttgacgctggccgtgatttccgccgcc
ctcggggcggctgttggggccgcgcccgctgccgcccagaccgtgcggcaggcggtgcag
cctgcacagccccagacgccgcaggaggccgtggcggccgcccgcgatgcggtcaacaag
cgccagtgggcgcaattgccgccgctggtgtcgcgcgccaagggcgatcccctggccatg
tatgccgaatactggctgctgcgctatcgcctgaacgcgtcttcggtgccgacgcccgcc
gcggatctcgaggatttcatgcggcgtaaccagggcgcctacctggccgaccgcctgcgt
ggcgactgggtgctggccgccacgcgctcgggcgatttcgccaccgcgcgccgcctgggc
gaggtcgtggccgccaccgaccaggtgaagtgcgcgcaactggaggccgcgcacctgggc
ggccaacgcgccacgcccgcgcaagcccaggctgtcttcacgccgggctctgcctgttgg
gacctctatgaccaactggtcgccgaccgggtgctgggcccgcagcagttgatcccggcg
ctgcgcgacgcgctggaagccaacaagcgcgacgatgcgcgccgctatgcggtgtatgtg
ttcgagcccgcgcaactgcgcgattacgacgcgctgatgaaggatcccatgaagtggctg
gtgcgccagccgcgtccggtcaagggcgacatggagcgcgagctggtggccgtggcgctg
tcgcgcctggcgcgcagcgacatgacgcccggcgaggcctatctgcgccgcgagtgggag
ggcctgccgcgcgaactgaagcagtgggtctacagccagttcgccctggtggcggtgctc
aatctcgatgatcgtgcccacgagtggtacaagcacgcgggtgacgtgcgcatgagcgaa
tacaaccacgcctggcgcgtgcgtgccgccttgcgccagccgaagatcgactgggcgtgg
gtcatgaagtccatcagccagatgccggcctcgcagcaggccgagcccgtctgggtgtac
tggcatgcgcgtggcctgcaggccaccggccatcccgagcaggcgcgcaagcagtacgaa
agcatcgcccccggtttcaacttctatggccagctggcggccgaggagctgggccgcgtc
atcaccgtgccggcccgtccttcgccgctgaccgacgccgagatcgccgaggcgcgtggc
catgccggcctgcagcgtgccgtggcgctcttcaagctgggctggcgcccggaggccgtg
cccgagtggaactactcgctgcgcggcatgaatgaccggcagctcatggccgcggccgag
ctggcgcgccaggaaggcatctacgaccgcgtggtcaacacgtccgagcgcaccgagagc
gagttcgacttcacccagcgcttcatcgcgccgttcgaaggccgggtcagcgcgcaggcg
cgccagatttcgctggatccggcctgggtctatggcctcatccgccaggagtcgcgtttc
atcaccgacgcacgttccgtcgtgggcgcatcggggctgatgcagctgatgcccgccacg
gccaagtgggtggcgaagcggatcggcatgaccgacttccagccttcgcgcgtgaacgag
ttcgaggtcaatacgatcctgggcacgaactacctgaacatggtgctgggcgacctcaac
ggttcgcaggtgctggccagcgccggctacaacgccggtccgggccgtccgcgcctgtgg
cgctcgcgcctgtcgcatccggtggaaggcgcgatcttcgccgagacgattcctttcacc
gagacgcgcctgtatgtgaagaacgtcctgtcgaacgccacgtactacgcggcgctcttc
accggcgagccgcagtcgctgaaggcgcgcctgggccacatcgcgccgcaacgcaacgaa
cgcacggccttgccgtga
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