Oenococcus sp. UCMA 16435: DSM07_02550
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Entry
DSM07_02550 CDS
T05781
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
oen
Oenococcus sp. UCMA 16435
Pathway
oen03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
oen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSM07_02550 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oen03400
]
DSM07_02550 (mutM)
Enzymes [BR:
oen01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DSM07_02550 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DSM07_02550 (mutM)
DNA repair and recombination proteins [BR:
oen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSM07_02550 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AZZ60273
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All DBs
Position
complement(494050..494874)
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AA seq
274 aa
AA seq
DB search
MPELPEVETVRRGLKKYFENEKIKDLKIIYPKLLDSDQTEFVQKVVGSKVSRIDRRGKFL
LFRLDNQLTIVSHLRMEGRYSVENSQESPHKHTEMIFKLDNGKQVFYDDTRKFGKMKLVK
SGNEAIEVKSIGSMGPEPIETDLTLDYFYNRLQKSKKAIKAWLLDQNNVAGIGNIYADEV
LWLSKISPLRPTNDISKEEADNLRENIIQELAFAIKNGGSTVHSFIDASGHTGRMQDKLH
AYGRAGQPCERDGGELIKIRVAQRGTTYCPKCQK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccggaagttgaaacggtccgtcgtggattaaaaaaatattttgaaaat
gaaaaaatcaaagatttgaaaattatttatccaaaactattggatagcgatcagacggag
tttgtccaaaaagttgtcgggtcaaaggtttcccgtattgatcgacgcggaaagtttttg
ctttttcgtcttgataatcaattgactattgtttctcatttgcgtatggaaggaagatat
tcggttgaaaattctcaggagtctcctcataaacatacagaaatgatttttaaactggat
aatggtaaacaggtcttctatgatgatacgagaaaatttggaaaaatgaagctggtgaaa
agcggcaacgaagcaattgaagtcaagtcgattggatcaatgggtccggaacctatcgaa
acagatttaacacttgattatttctataatcgtttgcaaaaatccaaaaaagctatcaaa
gcctggcttttggatcaaaataatgtcgctgggattggaaatatttacgctgatgaagtg
ttgtggctcagcaaaataagccctttgcgaccgactaatgatattagtaaagaagaagct
gacaatttgcgagaaaatataattcaagaattggcttttgcaattaaaaatggcggttca
accgttcattcttttatcgatgcgtccggtcatacagggcgtatgcaggataaacttcat
gcatacggacgagcaggccaaccctgcgagcgcgatggaggagaattaattaaaattaga
gttgcacaaaggggaacgacttattgtccgaaatgtcaaaaataa
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