Olea europaea var. sylvestris (wild olive): 111377899
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Entry
111377899 CDS
T05244
Name
(RefSeq) RNA polymerase II transcription factor B subunit 2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03022
Basal transcription factors
oeu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111377899
09124 Replication and repair
03420 Nucleotide excision repair
111377899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oeu03021
]
111377899
03400 DNA repair and recombination proteins [BR:
oeu03400
]
111377899
Transcription machinery [BR:
oeu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111377899
DNA repair and recombination proteins [BR:
oeu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111377899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
111377899
NCBI-ProteinID:
XP_022856816
LinkDB
All DBs
Position
Unknown
AA seq
453 aa
AA seq
DB search
MPQVRMVARNFMDMVASLPALKLDKLYENSFICEAILRSLPPLAKKYVLQLLYIDGPVTA
KLLEEWVLPDGVSKHKVAIDRLIQLRVLSETLDRKKEATYRLNPTFQLNLQKHISHGGIL
PREPMPSNVTVRLPSLEDLDAYAVQQWECFLLHLINSAEAEKSTNISSSMMKVFQRCLLN
QRDDREPPKLTESGFQFLLMDTSAQLWYIIREYISNSEDHGVDTADLIAFLLELSFHVTG
EAYNVNTLTDVQRQIIKDLADLGLVKLQQGRKESWFIPTKLATNLSISLADSSSRKQGFV
VVETNFRMYAYSTSKLHCEILRLFSRIEYQLPNLIVGAITKESLYKAFESGITSEQIISF
LQQNAHPRVAEKIPTVPENVTDQIRLWESDLNRVEMDPAHLYDEFPSRDVFESACDFARE
YGGLLWENSKKMRIVVKAEIYAQMKEFLRRQKE
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaggtgagaatggtggcaagaaattttatggacatggtggcatcattacctgca
ttgaagctggacaaactctatgaaaattctttcatttgtgaagcaatactcagatcgttg
cccccattggcaaagaaatatgtgctccaactgttgtacatagatggaccagtgacggcg
aagttgttggaagaatgggtacttcctgatggggtttcaaagcacaaagtggccattgat
cgattgatacagctgagagtcttgagtgaaactcttgataggaaaaaagaggctacttac
agattaaaccctacatttcagctcaacctccagaagcacatatcgcacggtggaatatta
cctagagaaccgatgccttcgaacgtcacagtgaggctccctagcttggaagatttagat
gcatatgctgttcaacaatgggagtgcttcttgctgcatcttataaattctgctgaagct
gaaaaatcaacaaatatcagctcttcaatgatgaaagtgttccaacgctgccttctgaac
caaagagatgaccgggaacccccaaaattgactgagagtggcttccagtttttgctgatg
gacacaagtgcacaactttggtacattatcagagaatatataagtaactctgaggatcat
ggcgtggatacagctgatcttatagcgttcctgctggaactcagctttcatgtgactggc
gaggcatataatgtgaacactttgactgatgtccagcgccaaataataaaggatcttgca
gatttgggattggtcaagcttcagcagggcaggaaagagagttggttcatacccaccaag
ttggctacaaatctctccattagcttagctgattcatcttcaaggaaacagggatttgtt
gtcgtggaaacgaacttcaggatgtatgcatattcaacatctaaattacactgcgagatc
ttgcggctcttctcaaggatcgagtaccagcttcctaacctcattgttggtgcaattaca
aaagaaagcttgtataaagcttttgaaagtggcattacctcagagcagataatttctttt
ctccagcagaatgcacatcctcgagttgcagagaaaatacccacagtaccagaaaatgtt
actgatcagattaggttgtgggagtcggatttgaacagggtggagatggatcctgctcat
ctttatgatgaatttccttcgagagatgttttcgagtctgcttgtgattttgcacgagag
tatggtggtttgctgtgggaaaattctaagaagatgcgtattgtggtgaaagcagaaata
tatgcccaaatgaaagaatttcttcgtcgacaaaaggaatag
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