Oxalobacter formigenes: BRW83_0291
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Entry
BRW83_0291 CDS
T04835
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ofo
Oxalobacter formigenes
Brite
KEGG Orthology (KO) [BR:
ofo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ofo03032
]
BRW83_0291 (gyrB)
03400 DNA repair and recombination proteins [BR:
ofo03400
]
BRW83_0291 (gyrB)
Enzymes [BR:
ofo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
BRW83_0291 (gyrB)
DNA replication proteins [BR:
ofo03032
]
Prokaryotic type
DNA Topoisomerases
BRW83_0291 (gyrB)
DNA repair and recombination proteins [BR:
ofo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BRW83_0291 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
Toprim_4
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ARQ45060
LinkDB
All DBs
Position
complement(281346..283838)
Genome browser
AA seq
830 aa
AA seq
DB search
MSQNSQNDVQQNEENYGVSSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSID
EALAGFCTEIHVTLHADNSVSVVDNGRGVPTGIKFDDKNTPRRSAAEIVMTELHAGGKFD
QNSYKVSGGLHGVGVSCVNGLSTLLKLTIWRDGKEHYMEFAQGLPQNNSVEMINGVECSP
IKIVGVSDKQGTRVQFWPDPTIFTTIEFQYEVLARRIRELSFLNNGVRIRLTDQRTGKEE
IFAYEGGTRGFVEYINRGKSVLHPTIFQATGERMSELGTPIYVDISMQWNDSYNEQVLCF
TNNIPQRDGGTHLTGLRAAMTRVINRYIEENELAKKAKVDVTGDDMREGLTCVLSVKVPE
PKFSSQTKDKLVSSEVRGPVEEIITKTLTDFLQEKPNDAKIICSKIVEAARAREAARKAR
ELTRRKGVLDGLGLSAKLADCQEKDPSMCELYLVEGDSAGGSAKQGRDRKFQAILPLRGK
VLNVEKSRYEKMLSSEQITTLIATLGTSIGPDEFNIDKLRYHRIIIMTDADVDGAHIRTL
LLTLFYRQMPQLVERGYVYIAQPPLYKIKNGKDERYLKDDLEEANHMMSIALQGASLTPR
EGAEPIAGEQLKEMADQHTIAYNIIQRISRMIDMDVLSAIMNGAKLNLNSMEEAEQSARS
LAKIINDPTVEVNVENNENGDIALSVIKTHYGNAHVTRLDKDFVYGNDYRTLEKTATAFL
NLIGPGAMITRGEGDRMRQLAVKNFHQAMQWLRSEAERGISKQRYKGLGEMNPDQLWETT
MDPTMRRLLKVKIEDAITADQIFTTLMGDNVEPRRAFIENHALLAGNIDV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaattcacaaaacgatgttcagcagaacgaagaaaactatggcgtttcctcc
attcagattctggaaggcctggaagctgttcgaaaacggcccgggatgtatatcggcgat
acgtcggatggtaccggtctgcatcatctggtttttgaagtgctggataactcgatcgat
gaagcccttgccggtttctgtacagagatccacgtcacgctgcacgcggataattccgta
tccgtggtcgataacggccgtggcgttccgaccggtatcaaatttgacgataaaaacaca
cccagacgcagcgctgccgaaatcgtcatgactgaactccatgccggaggcaaattcgac
cagaactcgtacaaggtttccggtgggctgcatggcgtcggcgtttcctgcgtcaatggc
ctgtccaccctgttgaagctgaccatctggcgcgacggcaaagagcattacatggaattt
gcacagggactcccgcaaaacaattccgtcgagatgatcaatggcgtcgaatgctcgcca
atcaagattgtcggggtatccgacaaacagggcacacgcgtccagttctggcctgacccg
acgattttcacgacaatcgagttccagtatgaagttctcgcccgaagaatccgtgaattg
tcgtttttgaacaatggcgtccgtattcgcctgaccgaccagcgtaccggcaaggaagaa
atttttgcctacgaaggcggcacgcgcggattcgtcgaatatatcaatcgcggcaaaagc
gtcttgcaccctacgatttttcaggcaaccggcgaacggatgtccgagttgggaacaccg
atttacgtcgatatttcgatgcaatggaacgattcgtacaacgaacaggtgctttgtttc
acgaacaatattccgcagcgtgatggcggtacccatctgaccggcctgcgtgccgcgatg
acacgcgttatcaaccgctacatcgaggaaaacgagctggccaaaaaagccaaggttgac
gttaccggcgacgatatgcgtgagggactcacctgtgtgctttcggtaaaagtcccggaa
ccgaaattcagctcccaaacgaaagacaagctggtctcttccgaagtccgtggccctgtc
gaggaaatcatcacgaaaaccctgaccgacttcctgcaggaaaagccgaacgacgcaaaa
atcatttgctcgaaaatcgtcgaggccgcccgtgcccgtgaagcggcacgcaaggcacgt
gaactgacacgcaggaaaggtgttctggatggacttggcctttccgcaaaactggccgac
tgtcaggaaaaagatccttccatgtgtgaactgtatctcgtcgaaggggattcggcgggc
ggttcggcaaaacagggaagagaccgcaaattccaggcgatcctgcctttgcgcggcaag
gtgttgaacgtcgaaaaatcccgatacgagaaaatgctttcttccgagcagatcacgacc
ctgattgcgacactgggtaccagtatcggcccggatgagttcaatatcgacaagctccgt
tatcatcgcatcattatcatgaccgatgccgatgtggacggagcccacatccgtacattg
ctcttgaccctgttctaccgccagatgccgcagctggtcgaaagaggctacgtatacatt
gcccagcctcctttatacaaaatcaagaacggcaaggacgagcgttatctgaaagacgat
ctggaagaagccaatcacatgatgtcgatagcccttcagggcgcttcattgacgccacgt
gaaggtgcagaaccgattgccggtgaacagttgaaggaaatggctgaccagcacaccatc
gcctataacatcatccagcgtatttcaagaatgatcgacatggatgtattgtccgccatt
atgaacggtgcgaagctgaacctgaattcaatggaagaagccgaacaatcggcccggtcg
ctggcgaaaatcattaacgatccaactgttgaagtcaacgtcgagaataatgaaaacggt
gatattgctctctccgtcatcaaaactcattatggcaatgcccacgtcaccagactcgac
aaggatttcgtatatggcaatgattaccggactctggaaaaaacggccacagcatttttg
aacctgatcggacccggtgccatgatcactcgtggtgaaggtgaccgcatgcgccagctg
gctgtgaaaaacttccatcaggcaatgcaatggctgcgttccgaagctgaaagaggcatt
tccaagcaacgttataaaggtctgggtgaaatgaatccggatcagttgtgggaaacgacg
atggacccgaccatgcgtcgtcttttgaaagtcaaaatcgaagacgccatcaccgcggac
cagattttcacgacgctgatgggcgacaatgtcgagccacgccgggcgtttattgaaaat
catgcacttctggccggcaatatcgacgtctga
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