Oxalobacter formigenes: BRW83_1818
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Entry
BRW83_1818 CDS
T04835
Symbol
prn_4
Name
(GenBank) Pertactin autotransporter
KO
K19231
fibronectin-binding autotransporter adhesin
Organism
ofo
Oxalobacter formigenes
Brite
KEGG Orthology (KO) [BR:
ofo00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ofo02000
]
BRW83_1818 (prn_4)
Transporters [BR:
ofo02000
]
Other transporters
Pores ion channels [TC:
1
]
BRW83_1818 (prn_4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Autotransporter
DUF4383
Motif
Other DBs
NCBI-ProteinID:
ARQ46559
LinkDB
All DBs
Position
complement(1935429..1939625)
Genome browser
AA seq
1398 aa
AA seq
DB search
MSKNVYRSVAPRRFYSARRGLIWLLMGMAGFIPLMVSQGVQAACTTGSSSAECVGTVNNT
ASIGTGPVVPDNNWTVTIGNGTTPTMVTQNGNTVISLNDNANITVKSGAVVQGSSSGSNG
GHFGSGPNVIEFNSNSTVTIEQGGTVQQLGTTNNGEAINAHGYGNTIVNNGTIYSKNGAA
LWFQDTTVSASTADRNKVVNNGTISTDKGAGYNVFGSSRGSSGPGLVFNNYGTVNGSLKF
GDGDDSLLFGPGSVITGNVDGGRGTNDLTLDANLNESATLGGSVLNFSSITKTGQGSWAI
LGGVPASDDDEHPSSPISGSLKGVNSLVVQEGLLSLVGANPEFNGTVSIDAPGILNVQAQ
GINGATSMVNNGNLTFEQPSNDSYTGSAITGTGQVVKSGAGSLTMSSNGDNTYSGGTSIR
DGALVVDRDSDLGVATGAVSFGTDNGAGATNGILRFDSSFDLADTRAIDLKDGGGTIDTQ
QYETTIAQTISGSGVLTKTGSGTLTLSGVNSYAGGTVIEEGTVGINSDAALGRTGSHLVM
QDTSTLRLDANVESNRTVILAGVPDSEMTIDTQANNGTFDGDIQGRGKLVKTGTGTLALY
GDNIYQGGTRVEEGTLAVNSDAALGSVVAPLELWDKTTLRLDGNTDMQTRPISIGGGGNP
APQSVTIDTQNFTGTIGQNIAESADGATRLDKTGTGVLELYGNNAHSGGTWIKNGTVAIL
SASGLGTGDAQLGDHDDSATGGTGDTMGSLRADADINFAAGQAVLLNQGGGTIDTNGHSV
MMADNTLKDGTTTGVAPDTGRDFHKDGDGTLTLLNDQLYSGRTFIDQGTLRLDAVDPNAP
MSNSKGLLNTSQVTIASGARLEGQGVVGNSMNDRIGNPDAPAAGSSAFTTIINNGTIAPG
LDNFNNAFDQTNPHFVPLTLAGNYRAGAGAMVEVHTELMDDTSRHGMLVIDGVVDPASDA
NGTGIRVIHQGGDGATTNHGIEIIRLQGTGSGLSQADLVKQLGDNFHLVSDFKTAKGENA
VVAGAYSYVLEKDVDWYGDATNQAGLFLRNAMTDDGTPVLHPGTPTYESYLPVLGALNRL
PTLEQRVGHRVWLEDSDSKGTGTSKAGRGAGKAGSRGVWVRLEGSTAKYKPELGSGGDNS
FDLNYGRANVGLDVPVYENRDGSRLVAGINGNAGKAKADIHSSLSDGDIDTDAYGLGATL
TWYDHSGFYADFQAKYNWYDTDMSVKNITSASHAVKGNNARGYAFSLEMGQNVDFAPNWS
LTPQAQLMYSQVNFDSFVDPQYSVIVNEKDYKSLEGRLGLALNYEKSEQDSLGRLSRDKL
YVIGNVYHEFKGDSTISISGVNYKSNLSDTWLGIGVGGSHNWNNDKYSVYGELGAKSSTR
KFGDEYELTAEVGLRIAF
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaatgtttatcgttctgttgcgccccgccgtttttacagcgcgcgcaggggg
ttgatctggctgttgatggggatggcgggtttcattccgctgatggtctcgcagggagtg
caggctgcctgcaccacgggttccagttccgccgagtgtgtcggcacggtcaataatacg
gcctccatcggaacgggccccgtcgttccggacaataactggacggtcacgatcgggaac
ggtacgactccgacaatggttacccagaatggcaatacggtcatcagcctgaatgacaat
gccaatataacggtcaagtccggtgccgtggtgcagggaagcagcagtggcagtaatggc
ggccatttcggcagcggccccaacgtcattgaattcaacagcaattcgacggtgacgatc
gagcagggcggtaccgtgcagcaattgggcacgacgaataacggcgaagccatcaacgcg
cacggatatggcaataccattgtcaataacggcacgatttacagcaagaacggcgcggcc
ctgtggtttcaggacacgactgtgtcggcgtcaacggccgaccggaacaaggtcgtaaat
aacgggacgatttcgaccgacaagggagcggggtacaacgtgttcggcagcagtcgcggg
agcagcggtcccggtctggtattcaacaattacggaaccgtcaacggttcgctgaaattc
ggcgatggtgacgacagtctgcttttcgggcccgggtcggtcattaccggtaacgtggac
gggggcaggggcaccaacgatctgacgctggacgccaatctcaatgaatccgccacactg
ggcggttcggttctgaacttttcttccattaccaaaaccggtcagggatcgtgggccatc
ctcggcggcgttcccgcttctgatgacgacgaacatccttcttcgcctatcagcggttcc
ctgaaaggggtcaattcactggtggtacaggaagggctgttgtcgctcgtgggggccaat
ccggagtttaacggcacggtcagcatcgacgctcccgggattctgaacgttcaggcacag
ggcatcaacggggcgaccagtatggtgaataacggtaacctgactttcgagcagccttcg
aatgacagttataccgggagtgccattaccggaaccggtcaggtcgtcaaaagcggagcc
ggttcattgacgatgagttccaatggggacaatacctacagcggcgggacatcgatccgg
gatggggcgctcgtcgtggacagggattcggatctcggggttgctacaggcgcggtcagt
ttcggtaccgataacggggccggtgcgaccaatggaatactgcgttttgacagttcgttc
gatctggccgatacgcgcgccatcgatctgaaagacggcggaggcactatcgatacgcaa
cagtacgagacgacgattgcccagacgatctcggggtcaggcgttttgaccaaaaccggg
agcggtacgctgacattgtcgggcgtgaacagctatgccggtggaacggttattgaagaa
ggtacggtcgggatcaattccgatgcggctctcggccggacaggaagccatctggtgatg
caggacacgtccacgctccggctggacgccaatgtcgaatcgaaccggacggtcattctg
gcaggtgtgccggacagtgagatgacaatcgacacacaagccaataacggcactttcgat
ggcgacattcagggccgtggcaagctggtgaaaaccggtaccggcacgctcgccctttat
ggcgacaatatttatcagggcggtacacgggtggaagaggggacactggccgtcaattcc
gacgcggctttgggcagtgtcgtcgcccctctcgagttgtgggacaagacgaccctgcgg
ctcgatggcaatacggatatgcagacaagaccgataagcatcggtggcggggggaatccc
gcgccccagtcggtcacgatcgatacgcagaattttacggggacgatcggccagaatatc
gccgaaagcgccgacggtgcgacccggctggacaagaccgggacgggtgtgctggaactt
tacggaaacaacgcgcatagcggtggcacatggatcaagaacggcacggtcgcgatcctg
tcggcatccggtctcgggacaggcgacgcccaactgggcgaccatgacgattcagccacg
ggaggcacgggcgacacgatgggtagcttgcgcgcggatgccgatatcaattttgcggca
gggcaggctgttttgctgaatcagggcggcggaaccatcgatacgaacggccatagcgtc
atgatggcggataacaccttgaaagacgggacgaccaccggtgtggcaccggataccggc
cgggatttccacaaggacggtgatggtacgctgacgctgttgaacgaccagctctattcg
ggacgtacctttatcgatcagggaaccttgcggctggatgcggtcgatccaaacgcgccg
atgtccaattcaaaaggcctgttgaatacatcgcaagtgacgattgcatccggtgcaaga
ctggaaggacagggagtggtcggcaattccatgaatgaccgtatcggcaatccggatgct
ccggctgccggttcgtcagcgttcacgacgattatcaataacggcacgatcgcgccgggg
ctcgacaacttcaacaatgcgttcgaccagacgaatccccatttcgttcccctgactctg
gcaggcaattaccgggcgggagcgggtgcgatggtagaggtccacaccgaattgatggat
gacacgtcccgtcatggcatgctggtcatcgacggggttgttgatcccgcttcagacgca
aacggcacgggtatcagggttatccatcagggaggcgatggcgcgaccacgaatcacggt
atcgagatcatccgtcttcagggaaccggttccggcctgagccaggccgatctggtcaaa
cagctgggtgacaatttccatcttgtatccgacttcaagaccgcgaaaggggagaatgcg
gttgtggccggagcctacagctatgttctggaaaaggatgtcgactggtatggcgatgcg
accaatcaggcaggcctctttttgcgtaacgccatgacagacgatggcactcccgtgctt
catccggggacgccgacttatgaatcgtatttgccggttctgggtgccctgaaccgtttg
ccgacgctggaacaacgggtgggtcatcgtgtctggctggaggattccgattcgaaaggg
acggggacatccaaagcgggacgcggagcgggcaaggccggttcaagaggcgtctgggtg
agactggaaggatcgaccgccaaatacaaaccggaactcggttccggcggggacaattcc
tttgacctgaattatggccgggcgaatgtcggtctggatgtgccggtgtatgaaaacagg
gacggttcccgtctggttgccggaatcaacggcaatgccggaaaagcgaaagcggatatt
cattcttccctgtctgacggcgatatcgataccgatgcctacgggttgggcgctaccctg
acgtggtatgaccattccggtttttacgccgattttcaggcgaaatacaactggtacgat
acggacatgtcagtgaagaacatcacgtcggcttcgcatgcggtcaagggaaacaatgcc
aggggttacgcattcagtctcgaaatgggccagaacgtcgattttgccccgaactggtcg
ctgactcctcaggcgcaattgatgtattcacaggtcaatttcgacagttttgtcgatccg
cagtatagcgtcatcgtcaatgaaaaggactacaagagcctcgaaggtcggctcgggctg
gccctgaattacgagaagagcgaacaggattcccttggaagactgtcgcgtgacaagctg
tatgtcatcgggaatgtctatcatgaattcaagggagattcgacaatcagcatttccggg
gtgaactacaagagcaatctcagcgatacctggctcggcatcggggtcggcgggtcgcat
aactggaataatgacaagtattcagtctatggcgaactcggcgcgaaaagcagtacccgc
aaattcggtgacgagtatgagctgactgctgaagtgggcttgcgaatcgctttttaa
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