Otolemur garnettii (small-eared galago): 100956886 Help Entry 100956886         CDS       T07855                                  Symbol LIG1 Name (RefSeq) DNA ligase 1 isoform X2   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism oga  Otolemur garnettii (small-eared galago) Pathway oga03030   DNA replication oga03410   Base excision repair oga03420   Nucleotide excision repair oga03430   Mismatch repair Brite KEGG Orthology (KO) [BR:oga00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     100956886 (LIG1)    03410 Base excision repair     100956886 (LIG1)    03420 Nucleotide excision repair     100956886 (LIG1)    03430 Mismatch repair     100956886 (LIG1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:oga03032]     100956886 (LIG1)    03400 DNA repair and recombination proteins [BR:oga03400]     100956886 (LIG1) Enzymes [BR:oga01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      100956886 (LIG1)     6.5.1.6  DNA ligase (ATP or NAD+)      100956886 (LIG1)     6.5.1.7  DNA ligase (ATP, ADP or GTP)      100956886 (LIG1) DNA replication proteins [BR:oga03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     100956886 (LIG1)  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      100956886 (LIG1) DNA repair and recombination proteins [BR:oga03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      100956886 (LIG1)    NER (nucleotide excision repair)     Other NER factors      100956886 (LIG1)    MMR (mismatch excision repair)     Other MMR factors      100956886 (LIG1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C DDR PucR DUF1685 Motif Other DBs NCBI-GeneID:  100956886 NCBI-ProteinID:  XP_012669304 Ensembl:  ENSOGAG00000000718 LinkDB All DBs Position Unknown AA seq 903 aa AA seqDB search MQRSIMSFFHPKKEGKVKKPEKEASNSNREMEPPPKTALKEWNGVPDDSPVKRPTRKTAR VLGSEGEEDDEALTPTKGQKPAPDCLKVSPPSPATSPENSPSLSDTSPMGVSPVVILKRR TARKQLPKRTIKDVLEEQREDKDREAKKRKEEEGEALREAETPREGLTEAEVAVKKEAEE AEKPKERVSEPKVSVKQEAQEDDAKPPSRALKTLSSFFIPRKPAVKKEVEEEGPQAPGKE GTEGPLDPTIYNPAKNNYHPIEDACWKPGQKVPYLAVARTFEKIEEVSARLRIVETLSNL LRSVVALSPPDLLPVLYLSLNTLGPPQQGLELGVGDGVLLKAVAQATGRQLESIRAEVAE KGDVGLVAESSRSTQRLMLPPPPLTASGVFSKFLDIARLTGSASTTKKMDIIKGLFVACR HSEARFISRSLSGRLRLGLAEQSVLAALAQAVSLTPPGQEFPLAVVDAGKGKTAEARKSW LEDQVMILKRTFCEVPDLDRIVPVLLEHGLEHLPEHCRLSPGIPLKPMLAHPTRSVSEVL KRFDEAAFTCEYKYDGQRAQIHVLEGGEVKIFSRNQEDNTGKYPDIISRIPKIKLPSVTS FILDTEAVAWDREKKQIQPFQVLTTRKRKEVDASEIQVQVCLYAFDLIYLNGQSLVREPL SRRRQLLRENFVETEGEFVFATSLDTKDTEQIAEFLEQSVKDSCEGLMVKTLDVDATYEI AKRSHNWLKLKKDYLDGVGDTLDLVVIGAYLGRGKRAGRYGGFLLASYDQDSEELQAICK LGTGFSDEELEEHYQKLQDLVLPAPRSYVRIDGAVAPDHWLDPSTVWEVKCGDLSLSPIY PAARGLVDSEKGISLRFPRFIRVREDKQPEAATTSTQVAYLYRKQSQIQNQLGEDSDSNL EDI NT seq 2712 nt NT seq  +upstreamnt  +downstreamnt atgcagcgaagtatcatgtcatttttccatcccaagaaagagggtaaagtgaagaaacct gagaaggaggcatccaacagcaacagagagatggagccccctccaaaaacagcactgaaa gagtggaatggagtgcctgatgactcaccagtgaagaggccaacgaggaagacagcccgg gtcttgggcagtgaaggggaggaggacgatgaagccttgactcccaccaaaggccagaag cctgccccagactgcctgaaagtctcccctcctagtcctgccacatctcctgagaacagc ccttccctctctgatacctctcccatgggtgtctccccagtggtgatcctgaagcgccgt acagctcggaagcagctcccgaaacggacaattaaggatgtcctggaagagcagagggag gacaaggacagagaagccaagaagaggaaggaggaggaaggtgaagcactgagagaagca gagacaccaagagaaggcctcacagaggctgaagtggcagtgaaaaaggaagcagaagaa gcagaaaaacctaaggaaagggtttcagagcccaaagtgtctgtgaagcaggaagcacag gaggatgatgcaaaacctccctccagagctctgaagacactcagcagcttcttcatcccc cggaagccagctgtcaaaaaagaggtggaagaagaggggccacaggctccaggaaaggag ggcacggagggacccctggacccaaccatctacaatcctgccaagaacaactaccatccc attgaagatgcctgctggaaaccaggccagaaggtcccttatcttgctgtggcccggacc tttgagaagattgaggaggtttctgctcggctccggatagtggaaactctgagcaacttg ctgcgttccgtggtggccctatcacccccagacctcttgcctgtcctctacctcagcctc aatacccttgggccaccccagcagggcctggagcttggtgttggtgatggtgtccttctc aaggccgtggcccaggccacaggtcggcagctagaatccatccgggctgaggtggctgag aagggagatgtcgggctggtagccgagagcagccgtagcacccagaggctcatgctgccg ccacccccactcactgcctccggggtcttcagcaagttcctagacatcgctagactcact ggcagtgcttccacgacaaagaagatggacatcatcaaaggcctctttgttgcctgccgc cactcagaagcccgattcatctccaggtccctgagtggacggctacgcctggggctggca gagcaatcggtgctagcagcccttgcccaagctgtgagcctcacacccccaggccaagaa ttccccctagccgtggtggatgctgggaagggcaagacagcagaggccagaaagtcatgg ctggaggaccaagtcatgatcctgaaacggacattttgtgaggtgcctgacctggaccga attgtccctgtgctgctggagcatggcctggaacatcttccggagcactgcaggctgagc ccaggcatccccctgaaaccgatgttggcccatcccactcgaagtgtcagtgaagtcctg aaacgctttgatgaggcagctttcacttgcgagtacaaatatgatgggcagagggcacag atccatgttctggaaggcggggaggtgaagatcttcagcaggaatcaggaggataatact gggaagtacccggacatcatcagccgcatccccaagattaaactcccatcggtcacatcc tttatcctggacactgaagctgtggcttgggatcgggaaaagaagcagatccagccattc caagtgcttaccactcgcaaacggaaggaggtggatgcatcagagatccaggtgcaggtg tgtttatacgccttcgacctcatctacctcaatggacagtccctggtacgtgagcctctt tcccgacgccggcagctgctccgagagaactttgtagaaacagagggtgaatttgtcttc gctacttccctggacaccaaggacactgagcagattgccgagtttctggagcagtctgtg aaagactcttgcgaggggctgatggtgaagaccctggatgttgatgccacctacgagatt gccaagagatcacacaactggctcaagctgaagaaggactacctcgatggtgtgggtgac accctggaccttgtggtgatcggagcctacctgggccgagggaagcgggctggccggtat gggggcttcctgctggcctcctacgaccaggacagtgaggagctgcaggctatatgcaag cttggaactggcttcagtgacgaggagctggaggagcattaccagaagctccaggacctg gtgcttcctgcaccccgctcctacgtgcgcatagatggtgccgtggctcccgaccactgg ctagaccccagcaccgtgtgggaggtgaagtgtggagatctctccctctctcccatctac cccgctgcccggggcctggtggatagtgagaagggcatctcccttcgcttccctcggttt attcgagtccgtgaagacaagcagccagaggcagctaccaccagtacccaggtggcctat ttgtaccggaaacaaagtcaaattcagaaccaacttggtgaggactcagactctaacctt gaagacatatag

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