KEGG   Oceanobacillus iheyensis: OB1408
Entry
OB1408            CDS       T00093                                 
Name
(GenBank) hypothetical conserved protein
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
oih  Oceanobacillus iheyensis
Pathway
oih03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:oih00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OB1408
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oih03019]
    OB1408
Messenger RNA biogenesis [BR:oih03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     OB1408
SSDB
Motif
Pfam: RNase_J_C Lactamase_B Lactamase_B_2 RMMBL DUF4453
Other DBs
NCBI-ProteinID: BAC13364
JAMSTEC: OB1408
UniProt: Q8ER98
LinkDB
Position
complement(1450721..1452388)
AA seq 555 aa
MKFVKNDQAAVFALGGLGEIGKNTYAIQFQDEIILIDAGIKFPEDELLGIDYVIPDYTYL
VQNEDKIKGLIITHGHEDHIGGIPFLLREINVPIYAGPLAIGLIRNKLEEHGLLRNAKLI
TIQEDDIIKFRKTSVSFFRTTHSIPDSYGVVVKTPPGNIVHTGDFKFDFTPVGEPANLAK
MAEIGSEGVLCLLSDSTNSEVPGFTMSERVVGESIHDIFSRVDGRLIFATFASNIYRLQQ
VVEAAVKYNRKVAVFGRSMESAINIGLELGYIQAPKDTFIEGNQINRLPANEVTILCTGS
QGETMAALSRIANGTHRQIQLIPGDTVVFSSSPIPGNTVSVSRTINKLYRAGADVVHGKL
SNIHTSGHGSQEEQKLMLRLIRPKFFMPIHGEYRMLKEHVKLGELCDVEAENSFVMDNGD
VLALSKDHAAIAGKIPSGSVYVDGSGIGDIGNIVLRDRRILSEEGLVIVVVSINMSDFKI
ASGPDIISRGFVYMRESEDLINQAQKLVSNHLEKVMERKTTQWSEIKNEITDTIAPFLYE
KTKRRPMVLPIIMEI
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgaaatttgtcaaaaatgatcaagctgctgttttcgctctaggtggactaggtgaaatc
ggcaaaaatacgtatgccatccaatttcaagatgaaattattttaattgatgctgggatt
aaatttcctgaagatgaacttttaggaattgattatgttatccctgattatacgtattta
gtacaaaacgaagataaaataaaagggttaattattacccatggtcatgaagaccacatt
ggtggtattccatttttactgcgtgaaattaatgtgccaatttacgcaggtccattagca
attggactaattcgcaataaattagaagagcatggcttactaagaaatgcaaaactaatt
accattcaagaagatgatattattaaattccgaaaaacatccgttagcttcttccgtacg
acacatagtatccctgattcttatggcgtcgtagtaaaaacaccacctggtaacattgtt
catactggtgatttcaaatttgatttcacacctgttggtgaacccgctaaccttgcaaaa
atggctgagattggttcagaaggtgtattatgccttctgtcagatagtactaatagtgaa
gtacctgggtttacaatgtccgagcgtgtcgttggagaaagtattcacgatatattcagc
agagtcgatggtagattgatcttcgcaacatttgcttccaacatctatcgtttacaacaa
gttgttgaagcagctgttaagtacaatcgtaaagtagctgtatttggtagaagtatggaa
tctgctataaatattggcctggaattaggttatatccaagcgccgaaagatacatttatt
gaaggtaaccagattaatcgtcttcctgcaaatgaagtaacgatcctctgtactggttcc
caaggtgaaacaatggctgcactatctcgaattgcaaatggtacacatagacaaattcaa
ttaattcctggagacactgtagtattctcttcctctccaatcccggggaatactgtcagc
gtaagcagaaccattaataaactttatcgagcaggggcagatgttgttcatggtaagttg
agtaatattcatacctctggtcatggtagtcaagaagaacaaaaactaatgcttcgctta
attcgtccgaaatttttcatgccaatacatggagaatatcgtatgctaaaagaacatgtt
aaattaggagaattatgtgatgtagaagctgaaaattcttttgtaatggataatggtgat
gttctagcactaagcaaggatcatgcagctattgctgggaaaataccttctggatccgta
tacgttgacggtagtggaattggtgatataggaaatattgttctacgagatcgtcgcatc
ttatctgaagaaggattagttattgttgtagtgagcattaacatgagtgacttcaagata
gcttctgggccagatattatctctcgaggctttgtatatatgagagaatctgaagactta
ataaaccaagctcaaaaattagtgtctaatcacttagaaaaagtaatggagcgtaaaaca
acacaatggtcagagattaaaaatgaaatcactgatacaattgctccattcctatatgaa
aaaacaaaaagacgtccaatggtacttccaattatcatggagatttaa

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