Oryzias latipes (Japanese medaka): 100049519
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Entry
100049519 CDS
T02443
Symbol
rb1
Name
(RefSeq) retinoblastoma-associated protein
KO
K06618
retinoblastoma-associated protein
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04110
Cell cycle
ola04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100049519 (rb1)
04218 Cellular senescence
100049519 (rb1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ola01009
]
100049519 (rb1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
100049519 (rb1)
Protein phosphatases and associated proteins [BR:
ola01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100049519 (rb1)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
100049519 (rb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
Motif
Other DBs
NCBI-GeneID:
100049519
NCBI-ProteinID:
XP_004076525
UniProt:
A0A3B3HY85
LinkDB
All DBs
Position
14:complement(15912293..15936887)
Genome browser
AA seq
916 aa
AA seq
DB search
MPPKKRNSGAAQSKEPKPSSDKSFADKKGSPEFSLNKHTEKDVEFVTLCKSLHATDSVCE
RAWTLWKTVQDVMEDVDANQKRLWGSCLFVTATDMDAACFTLTEVLKAVNINVKQFVGLV
RKLDVNLDTISTKVNSALMRVEKKYDVMLALYQRFEKTCKKIFASTPDKKERATMRTCWT
MFLLAKGRALQMEDDLVISFQLLLCTLELFIKRSSPELLLPLYKSVVSKAQSPLTRTSRR
NQSKAKSRVVESEVNVELLETLCKDNECNAEEVKNVYQTSFSAFLDLMDLSRFPDFPLVT
DVSEQYQEHYLKSGDIDGRLFFDGDETVLAPKVDISQVERTPKKTSPDDDGPLIPPQTPI
RAAMNSIKMLRGDLPSSGDQPSSNLAIYFKNCTVDPTQGIQKRLEMLGQVFSQKFGEAVG
PHCIVYGRERFTLGVRLYYKVMEAMLESEEKRLSVQNFSKLLNDSTFHMSLLACALEVVM
ATYEESSFKNRGCSHGEGDQAVRDLCFPWILDVFDLSAFDFYKVIESFIKAEPTLSKDII
KHLETCENLIMEKIAWRTGSPLFELLKRENEAGATEQAEPPASFSLPLQHNHTAADLYLS
PIRPGLRVLPPESPATPSSQASSQPTPQAAGQAPRQPKSNSLSLFYKKLYRLAYTRLKTL
CSCLLSNHPDLEHVIWTLFQHTLQYEYDLMRDRHLDQLMMSAMYAICKVKSVDLRFKLIV
SAYKNMPNTSQETFKHVLITEGQYDSIIVFYNQVFMQKLKTNILQYASTRPPTLSPIPQI
PCSPYKFPNSPLRVPGSNNVYISPLKNSRLSPGMMTPRSRMLVSIGESFGFANRFQKINQ
MVNSGDRAHKRTLDGGSALKPLKRLRFDVDGQDEADGSKSGGESALIQKLAEMSSTRSRM
QEQKMKEDAESRKKTT
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgccgcctaaaaaacgcaactcgggagcggcacagagcaaggagccgaagccgagttct
gacaaaagctttgcagacaagaaggggagtccagagttttctttgaacaaacacacagag
aaggatgtggagtttgtgaccctgtgtaagagcctccacgccacggattccgtgtgtgag
cgcgcgtggactttgtggaaaactgtacaggatgtgatggaagatgttgatgccaatcag
aaaagactgtggggttcttgtctatttgtgactgcaacagacatggatgccgcctgtttt
accctgactgaagttctaaaagctgtcaatatcaatgtgaaacagtttgtcggcctggtg
agaaagttggatgtaaacttggatacgataagcactaaagtgaattcagcactgatgcga
gtggagaagaagtacgatgtgatgctggctctttaccagaggtttgagaaaacgtgcaag
aaaatctttgcttcgacccctgataaaaaggagagggcaaccatgcgtacttgctggaca
atgtttcttttggcaaaaggaagagccttgcagatggaggatgacctggtcatatcgttc
cagttgttgctttgcacgctggaattgttcatcaagcgcagctctccagagcttttgctg
cctctgtacaagtcagtcgtcagcaaagctcagagtccgctaacaagaacatctcgccgc
aaccagagcaaagccaaatcccgcgttgtggaatctgaggttaatgtggagcttctggaa
actttgtgcaaagacaacgaatgcaacgctgaggaggtgaagaacgtttaccagaccagc
ttctcagcttttctcgacctgatggatctttccagattcccagattttcctttggtgact
gatgtcagcgagcagtatcaagagcactacctgaagagtggagacattgatggtcgactg
tttttcgatggagatgaaaccgtccttgcaccaaaagttgacatttcccaggtagagaga
actcccaagaagacctcaccggatgatgacgggccattaatccctccacagacaccaatt
agagctgcaatgaattctatcaagatgctgaggggtgaccttccctccagtggagaccag
ccatcctctaatcttgcgatatattttaaaaactgcactgtggacccaacccagggtata
cagaagcgtttggagatgcttggacaggtgtttagccagaagtttggtgaggccgttgga
ccgcattgcattgtgtatggcagagagagatttactcttggagttaggctgtattacaag
gtcatggaggcaatgctagaatcggaggagaagcgactgtctgtgcaaaatttcagcaaa
cttctcaatgactccacgtttcacatgtcccttttggcttgtgctttggaagtcgtcatg
gcaacatacgaagagagcagtttcaaaaacagaggatgcagtcatggagaaggcgaccaa
gcagtgagagacctgtgtttcccgtggatactcgatgtgttcgatctctccgcctttgac
ttctacaaagtcatcgaaagcttcatcaaggctgaaccaactctgagcaaagatattatc
aaacatctggagacgtgtgagaacctcatcatggagaagatcgcatggaggacgggctcc
cctttgtttgagctgctgaagcgggaaaatgaagctggagccacagaacaggccgagccc
ccggcgagtttcagcttacctctgcaacacaaccacacggcagctgacctatatctatcc
ccaattcgcccaggtctccgtgtcttgcctcctgaatcaccagccacgcccagctctcag
gcttcctctcagccgacacctcaggcagcaggccaagctccacggcaaccaaagtctaac
tctctgagcctcttctataaaaaattgtatcgactggcatatacgaggctgaagactctt
tgttcctgcctgctttccaaccacccggacctggagcacgttatatggactctgttccag
cacacgctgcaatatgagtatgatctaatgagggaccgtcaccttgaccagttgatgatg
tctgccatgtatgcaatttgcaaagtaaaaagcgtcgacctgcgcttcaagttaatcgtc
tctgcctacaagaacatgcccaacaccagccaagagacctttaagcacgtgttgatcaca
gaaggccagtacgactccatcatcgtcttctacaatcaagtgtttatgcagaagttaaaa
accaacatcctgcagtatgcatccacccggccacctactctttctccgatccctcaaatc
ccatgcagtccctacaagttcccaaactcccctctgcgtgtgccgggaagcaacaatgtg
tacatttctcctctaaaaaactcacgcctgtctccgggtatgatgactcctcgctccaga
atgctggtttccattggtgaatcttttgggtttgccaaccgcttccagaaaatcaaccag
atggtgaacagcggtgaccgcgctcacaagaggactctggatggtggctctgctctaaag
cctctgaagaggctacgctttgatgtggacgggcaggatgaagctgatggcagcaaatct
ggaggagagtctgcactgatacagaagcttgcagagatgagctccactcgcagtcgaatg
caagagcagaagatgaaggaggatgcagaatccaggaaaaaaacaacctaa
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