Oryzias latipes (Japanese medaka): 100302040
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Entry
100302040 CDS
T02443
Symbol
prox1b
Name
(RefSeq) prospero-related homeobox protein 1b
KO
K20211
prospero homeobox 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
100302040 (prox1b)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain PROS
100302040 (prox1b)
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Gene cluster
GFIT
Motif
Pfam:
HPD
AATF-Che1
NifQ
Motif
Other DBs
NCBI-GeneID:
100302040
NCBI-ProteinID:
NP_001155231
UniProt:
C4TJE1
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Position
2:13605143..13646045
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AA seq
882 aa
AA seq
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MPDHDNATLLLARQTKRRRVDIGVKRTVGSVIFTRARETLLDRMNPTHCSDQDGDCSLIG
HGHGSTNGDGEKSNVLRKLLKRANSYEDAIMPFSGATIISQLLKSSMGKNGGSDSGFQGS
GALSSGGSEIHNEDACSNSSRDQDSPSDCLSPGHHLPPPTSSSFGRPQPNSNHNSHTSSQ
TLSLSTFDLDRLSDEHLRAKRARVENIIRGMSHSPLVRSSGGDQDNLRESENGHRGDRGE
RGDSGGGHNASNHNDCPSSLLSSPGSRGGVVGVGEVYRENKRKQRLPQQQHSFTQLVCSR
QEQRQEERRQLKLQLEDMQKQLRQLQEKFYQIYDSETEEEEDNGEGREPERGGEREEDGN
LSEDSIRSDGLEERHRDRGRHGHDDLSDLDPGLFLDRARALLREQALIDGDLEKDADSRG
EEERNGERGMKRRAAAGGGGGRQLAETLKQELNCAVSQVVDTVVKGFSSPKQTATHHHGC
HSSTPAAPSSSSNSSSSCPPPFGPLPPLTPDSRFGGGTLGLNLNGDGSPTPNYHSNQRLH
CFGDVIVPSPLDSFGGLGGRLSGVPTPNDQTEALPLVVRKNGPENTNHSLPPPPPPHHPS
LHPSPLTASLGFSPPSFRHPFPLPLMGYPFQNPLGSHGGGYPSGPKDHHQSSPDSMDITR
EAVSLRTKMASLGGGHMGHHHHRQSSPNQHGSESLSLSLIKSECGDLQDMADISPYSGST
IQEGLSPNHLKKAKLMFFYTRYPSSNMLKMFFSDVKFNRCITSQLIKWFSNFREFYYIQM
EKFARQAINDGVTGAEELTVGRDAELFRALNMHYNKANDFEVPDRFLEVAQVTLREFFNA
IVAGKDADPSWKKAIYKVICKLDSEVPEVFKSPNCLQELLRD
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgcctgatcatgacaacgccactctcctactagcaagacaaaccaagcgccgacgcgtg
gacattggggtgaaaaggactgtggggagtgtgatattcacccgcgcaagggagaccctt
ctagacaggatgaacccgacgcactgctccgatcaggacggagactgctcactgatcggc
cacggccatggtagcaccaatggggatggagagaagtccaatgttctgaggaagctgcta
aagagggccaactcttacgaggacgccatcatgcctttttccggcgctacaatcatctcc
cagctgttaaaaagtagcatggggaagaacggagggagcgactcgggcttccagggaagt
ggagctctgtccagtggaggctctgaaatccacaatgaggatgcctgcagcaactcctcc
cgtgaccaagacagcccatcagactgcctgtctccaggacatcatcttcctcctccaaca
tcgtcctcatttgggaggccgcagcccaattcgaaccacaactcccacacctcctcccag
acgctttctctatccacgttcgacttggaccgtctgtccgatgaacacctccgtgccaag
cgagccagagtggaaaacatcatccgcggcatgagccactcgccgctggtccggagcagc
ggaggcgaccaggacaacctccgcgagagtgaaaacggacacaggggcgacaggggtgag
aggggcgacagcggcggcggccataatgccagcaaccacaacgactgcccctcttccctc
ctgagctccccggggtcacggggcggtgtggtgggtgttggggaggtgtacagggagaat
aagagaaagcagcgcctgcctcagcagcaacacagcttcacccagctggtgtgctccagg
caggagcagagacaagaggagaggaggcagctcaaactccaactagaagacatgcagaaa
cagttgcggcaacttcaggagaagttttaccagatctacgactcagagacggaagaagag
gaggacaatggagagggcagagagcctgagcggggaggggaaagagaagaagatgggaac
ttgtcagaggacagcattcggtctgacggtctggaggagaggcacagagacagaggaagg
cacggccacgacgacctgtctgacctggacccaggtctgttcctggaccgagcccgagct
ctcctccgtgagcaggccttgatagatggagacttggagaaggacgcagacagtagggga
gaagaggagagaaacggtgaaagaggaatgaagaggagagcagctgcagggggaggagga
ggaagacagttggccgagaccctaaagcaggagctgaactgtgccgtgtcgcaggtcgtc
gacactgtcgtgaagggtttctcctcgccgaagcagacagccactcatcatcacggctgc
cacagtagcacgccggccgcaccctcttcttcctccaactcgtcttcttcctgtccgccg
ccgtttggaccgctgccccctcttaccccagactcacgtttcggaggtggcaccctggga
ctcaatctgaatggcgatggcagccccacccccaattatcactccaaccaacggctgcac
tgcttcggggacgtaattgtaccaagtccgttagattcttttgggggtcttggcggcaga
ctgagtggtgtccccacccctaacgaccaaacggaggccctgccgttggtggtgcgcaag
aacggtccggagaacaccaaccactctcttcctcctccgccgcctcctcaccacccctcc
cttcacccgtctcccctcacagcttcacttgggtttagccctccatcgtttcgacaccca
ttcccccttcctctcatgggttacccttttcagaaccccttggggtcacatggggggggc
tacccctcagggcccaaagaccaccatcaatcctcccctgattccatggacataacccgg
gaagctgtcagcctacgaaccaaaatggcatctttgggagggggccacatgggtcaccat
caccacagacagagctctccaaaccagcatgggtcagagagcctgtcgctgtctctgatc
aagtctgagtgcggagacctgcaagacatggccgacatctcgccctactcgggtagcacc
attcaggaaggcttgtctccaaaccatctgaagaaagccaagctgatgttcttctacact
cgctatccatcctccaacatgctcaagatgttcttttctgatgtaaagttcaaccgctgc
atcacttcccagctgatcaagtggttcagcaactttcgggagttctactacatccagatg
gagaagtttgctcggcaggccatcaacgatggggtgactggtgccgaggagctgacagtg
ggccgggacgccgaactcttcagggccctcaacatgcactacaacaaagccaatgacttt
gaggttcctgatcgctttctcgaggtagcccaggtgactctgcgagagtttttcaacgcc
atcgtggccggtaaagatgccgacccttcttggaagaaggccatctacaaagtgatttgc
aaactggacagcgaggttcccgaggtgttcaagtcccccaactgtcttcaagagctccta
cgtgactga
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