Oryzias latipes (Japanese medaka): 101155155
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Entry
101155155 CDS
T02443
Symbol
grin3b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04020
Calcium signaling pathway
ola04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
101155155 (grin3b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
101155155 (grin3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101155155 (grin3b)
Ion channels [BR:
ola04040
]
Ligand-gated channels
Glutamate (ionotropic)
101155155 (grin3b)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
101155155
NCBI-ProteinID:
XP_023807296
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Position
22:complement(5157611..5281773)
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AA seq
1333 aa
AA seq
DB search
MVPLSGLWTYCLAPGGTRLLFASARRLLLILLLSAFSAPEACVPHTEPCPILARVGHTVR
LGALLPTRQPARIQNALNRALASIRHQSGGGGDSTATTASQLAPLLPYNLSLEMVARSPA
GWDPESLSRSACQDLVVRGVSAVLAFPRSKEELIQVEFLSSFLEIPFISILEDTEPLVTK
NPFHLQMSARVPPSTLGSLLLAVLQGGDVERARGSRDEDSWGGAAVICSGWDEGGDGLLT
HLQRHSGPNWHLWDIINLTRITGSRDKMGKEERREDQMEEEALNIISSSFLRSPSSISSV
LLLGSDPECLSSVLRAAQRLVPSLPALQWIMGYPLSPDSLHTLGGPLGLLAYGEVGRKPI
SFYIRDALQLIGRAVTAATNVRPDLALIQSTLNCYDKANKHEPPSSGRFLSRFLSNTSFT
GATGLIQVDPSVSRILSSQLFHVWSLKRGALGQPAWVTVGQWTRGQLDSDGDILGLVGGL
GNSQGQGLGAGVRGGDGQGDGHVGGRWRPGLSVEGHRLRVVTLVEHPFVFTREVDEDGMC
PAGQLCLDPKTNRSEIIQGLYNQLHNPNSTVVDLEGVDLPDDLRKCCYGYCIDLLEKLAE
DMGFTFDLYIVGDGKYGALSGTGRWTGLVGDLLSGAADMAVTSFSINSARSRVIDFTSPF
YSTSLGILVRSHDTAAPIGAFMWPLHWSMWAGIFVTLHLTALFLTLYEWNSPFGMTPHGR
NRLRVFSYSSALNLCYAILFGRTVATKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVM
VGEKTFEQVSGIHDEKLHHPSMGFRFGTVRESSAEDYMKKSFPEMHDYMRRFNQPTTPEG
VHMLKTDPPALDAFIMDKALLDFEVSIDADCKLLTVGKPFAIEGYGIGLPQGSPLTRNVS
EFVSRYKSDGFMDMLHDKWYKVVPCGKRVFAVTETLQMGIQHFSGLFVLLCIGVGGALLT
LAGEHTFYHLVIPRLRRSHTLQYWLHTSQKIHRALNTTYEDVGKELTGFDQNPSSCISEN
CTLHRKQQQQPPPPSPTSSLPASTTAGGTGNSSPSHETKEKRVHFDLETLHSYRLRTHTA
SVRGRPGMVGRPGLGLGGLGLGGLGSFTSPAQMSLHVNGGPVSTLASTGLVLSPIGNKAV
QTSLWEGELQELQEKIEIFRNQLREALARRAEIQSSLEREKIGLQRRDPSVDSEKDKPKI
QTFSTNKISSAQPKLPERDRTSQLQTLNNQQTGKANQPGGTGTVERGRSSQLNTVNTLDR
GRANQLRPADSLTGERTGQSHSSTSLERSRVSGSITIQTRDTSSLDRQKANLSRTLNTLE
RTKANQPSMSGGK
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggtgccgctttctggactctggacctactgcctcgcccctggaggaactcgtctcctt
ttcgcctctgccaggcggcttctgctgattctccttttaagcgccttttccgcccccgaa
gcctgcgtccctcacacggagccgtgccccatcctcgcgcgggtagggcacaccgtgcgc
ctcggcgcgctcctgccgacccgccagccagctcggatacaaaacgcgctcaaccgcgcc
ctggccagcatccggcaccaaagcggaggagggggggactccaccgccaccacagcctcc
caactggcacccctgctaccctacaacctgagtctggagatggtggcgcgctcccccgcg
ggctgggacccagagtcgctgtcccgtagcgcctgtcaggacctcgtggtcagaggggtg
tcagccgtgctggctttcccgcgctccaaagaggagttaatccaggtggagttcctctcc
tctttcctggaaatccccttcatctccatcttggaggacacagagccccttgtgactaag
aacccatttcacctgcagatgtcggcccgtgtgcctccatccacgctgggcagcctcctg
ttggcggtgctgcaagggggggatgtggagcgagccagaggcagccgggacgaagacagc
tggggaggagcagctgtgatttgctctggatgggatgaaggtggagatggcttgttgact
cacctgcagaggcacagtggtccaaactggcatttgtgggacatcatcaacctgacccgc
attacaggaagtagagataaaatggggaaggaggaaagaagggaagatcaaatggaggaa
gaagctttgaacatcatatccagcagtttcctgcgctctccctcttctatctcctctgtt
ctcctcttgggatctgatcctgagtgtctatcctccgtcctgcgagctgctcagcgcctc
gttccatcactaccagcattgcagtggatcatgggatacccgctgtctccggattctctg
cacactttaggaggtccccttggactgttggcctatggggaagttggacgcaaaccgatt
agcttctacatacgtgatgctttgcagctgatcggacgagccgtaaccgcagcaaccaac
gtgaggccagacctagccctcattcagagcacgctgaactgttatgacaaggcaaacaag
cacgaaccgccatcttcaggacgctttctttccaggtttctctccaatacctctttcacg
ggagccactggactgatccaagtggacccctccgtttctcggatcctgtcctcccagctg
ttccatgtgtggagcctgaagagaggtgctctgggccaaccagcttgggtcacagtgggc
cagtggacccgtggtcaattggactccgatggagacatcctgggactggtgggagggctt
gggaacagccaggggcagggtcttggggctggtgtgagaggaggggatggccaaggagat
ggtcatgtaggtggtcgctggaggccaggactttctgttgagggacatcgcctcagggtg
gtgacacttgttgaacacccctttgttttcactcgtgaggtagatgaagacggcatgtgt
ccagcggggcaactctgtttggatccaaaaaccaaccggtcggaaataatccaaggtctc
tacaaccagctgcacaaccctaactcaacagtggtggacttagagggtgttgacttaccg
gatgacctgaggaagtgctgctacgggtattgcattgacttgttggagaaactggcagaa
gacatgggcttcacctttgacctctatattgtgggagatggaaaatatggtgcgctgagc
gggaccggacgctggaccggtctagtgggggacctgctcagcggagcagctgacatggcc
gtcacctctttctcaattaactctgccaggagcagagtcatagatttcacctcgcccttc
tactccactagtctgggaattctggttcgcagccatgacactgcagcccccattggagcc
tttatgtggcctctccactggtctatgtgggcgggcattttcgtcacgctgcatcttaca
gcgctcttcctcaccttgtatgagtggaacagcccctttggcatgacacctcatggcagg
aacaggctgcgcgtgttctcctattcctctgccctcaatctctgctacgccatactgttt
ggacgcactgtcgccaccaagactcctaaatgctggacgggccgcttcttgatgaacctt
tgggccattttctgcttactggtgttgtccagctacaccgccaaccttgcagcagtcatg
gtcggggagaagacctttgagcaagtttctggaatccacgatgaaaagctgcatcacccc
tccatgggcttccgtttcgggacagttagggagagcagtgcagaggattacatgaagaag
agttttccagagatgcacgactacatgaggcgctttaaccagcccaccaccccggagggc
gtacacatgctgaagacagatcctcctgcgctggatgcattcatcatggacaaagccctt
ttggactttgaggtctccatcgatgccgactgcaaactgctcactgtggggaagcctttt
gccattgaaggttatggtataggccttccccagggctctcctttaacccgcaacgtatct
gagtttgtgagtcgctacaagtctgatggattcatggacatgctacatgacaaatggtat
aaggttgtgccctgcggaaagagagtctttgcggtgactgagactctgcaaatggggatc
cagcatttttccggcctgtttgtcctgctttgcattggtgttggtggagccctgttaacc
ctggcaggtgaacacaccttctatcacctggtcatcccccgcctgcgccgctcgcacacg
ctgcagtactggctgcataccagccagaaaatccacagagctctcaacaccacatatgag
gacgttggaaaggagctgaccggcttcgaccaaaacccgtcctcctgcatctcagagaat
tgcaccctccacaggaaacagcagcagcagcctcctcctccatctccaacttcctccctc
cctgcttccaccacagcagggggcactggcaactcctccccatcccatgaaaccaaggaa
aagcgggttcactttgacctggagactcttcacagctaccgcctgcgcacgcacaccgcg
tcggtgcgcggccggcccgggatggtcggccggcccggcctcggcctgggggggttggga
ctgggcggcctggggagtttcacctctcctgctcagatgagcctccacgtcaacggtggc
cccgtttccactctggcctccacaggtttggtgctctctcccattgggaacaaagctgtg
cagaccagcctgtgggagggggagcttcaggagctgcaggagaagatcgaaatcttccga
aaccagctgagagaggctttggctcggagagctgagatccagagcagcctggagcgagag
aaaattggactgcagcgcagggacccaagcgtggacagcgagaaagacaaacccaagata
caaactttcagcaccaacaaaatcagctccgctcagcccaaactcccagagagagaccgg
acgagccagctccaaaccctgaacaatcagcagacggggaaagcaaaccaaccgggagga
actgggactgtggaacgtggaagaagcagccagttaaacacagtcaacactttggacaga
ggacgagccaaccagctgaggcctgcagactctttaacaggagagaggactggacaatca
cacagttccacaagtttggaacggagtcgagtcagtggaagcatcaccatccaaacacga
gacacttccagcctggacagacagaaggctaacctgtcacgcactctcaacactttggag
aggacaaaggccaaccagccaagtatgagcggcgggaagtga
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