Oryzias latipes (Japanese medaka): 101157789
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Entry
101157789 CDS
T02443
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X2
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04120
Ubiquitin mediated proteolysis
ola04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101157789 (syvn1)
04120 Ubiquitin mediated proteolysis
101157789 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101157789 (syvn1)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101157789 (syvn1)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101157789 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-Nse
FANCL_C
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
101157789
NCBI-ProteinID:
XP_004073679
UniProt:
H2M041
LinkDB
All DBs
Position
10:complement(25731665..25741989)
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AA seq
627 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHLRVLSLMGLLGVMDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYILHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYVAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRATNNNQTQAPAQAPPPAPAAPANAP
AAPAPNVPPGMLPGFPPGVFPFWGPFPPVPPPAAAAAAPGGADAPPSSSEAAQSAGTSQP
ASSSPADTSPPAAAAAPGSAFPGFPFSFPPPPFPTAPWLPMPPPPPFVSSMPPPPPSLSR
LSEEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVTTLTPPRAESRSAEA
TSRTDAPAAPSSSEKSSSASDQASAAAAAVSSLPADSTSSALDTGGKESVDEGEAEDEDG
EPNAAELRRRRLRKLETASSSSAPSDN
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggtacgagccgccttagtaactgccaccagtctggcgttgactggagctgtagtggct
cacgcttatttactcaaacaccagttttacccaactgtggtctacctcacgaagagcagc
cccagcatggcggtgttgtatattcaggcatttgttctggtgtttctgcttggaaagttt
atgaggaaggtcttttttggccagctaagagctgcagagatggagcatctcatcgagcgc
tcgtggtacgcagtgacagagacgtgcctggctttcaccgtattccgagatgacttctcg
ccccgttttgttgccctcttcaccctcctgctcttcctgaagtgcttccactggctggct
gaggatcgagtggactttatggagcggagtccaaatatatcatggatttttcacctgaga
gtattatctctcatgggactgctgggtgtcatggacttcttgttcgtcaaccacgcctgc
cacagcatcatcacccgcggagcgtccgttcagctcgtctttggcttcgagtatgccatc
ctgctgaccatggtgctcacaaccttcatcaagtacattctgcacaccgttgacctgcag
agtgagaacccctgggacaacaaggccgtctatatgctctacacggagctcttcacaggc
ttcatcaaagtgctgctctacgtcgctttcatgaccatcatgatcaaggtccacaccttc
cccctgtttgccatccggcccatgtatttggccatgagacagtttaagaaagcggttacg
gatgctatcatgtccagaagagccatccggaacatgaacacactatatcctgatgcgacc
cctgaagatcttcaggcctctgacaacgtttgcatcatctgccgagaggagatggtcacg
ggcgccaaaaaactaccgtgcaatcacattttccactccagctgtctgcgctcttggttc
cagaggcagcagacctgtcctacgtgtcgcatggacgtcctcagagccaccaacaacaat
cagacgcaggctccagctcaggctccgcctcctgcgccagcggcccccgctaacgctcct
gcagctccagcccccaacgtccctccaggcatgctgccgggcttccctcctggtgtcttc
cctttctggggtccttttcctcctgtgcccccgcctgcagcagcagcagcggcccccgga
ggcgccgatgccccaccaagcagctcggaagcggcacaaagtgcaggcaccagccagccg
gcatcctcgtctcctgcagacacttctccccctgcagcagctgctgctccgggatccgca
ttcccagggttccccttctccttcccgcctcctccattccccaccgctccatggctgccc
atgcctcccccaccgccttttgtgtcctccatgccccccccgcctccttctctgtcccgc
ctgtcggaggaagagctgagggagttggaggctgaggggcggcgaggtctggaggccagg
ctgcagtgtcttcagaacatccacacgctgctggacgccgccatgctcaacatccaccac
tacctcagcaccgtcaccacgctcactcctcctcgggccgagagccgctctgctgaagcc
acaagccgcacggacgctcctgcagcccccagcagctctgagaagagctcgtccgcatct
gatcaagcaagcgccgccgccgccgcggtttcctctctacccgctgactccacctcctct
gctctggacactggaggaaaagaaagcgtggacgaaggagaggcggaggatgaagacgga
gaaccaaacgctgctgagctgaggaggcgccgcttacgcaagctggagacggcctcctcc
tcatcggcgccctcagacaactga
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